AMCG00010553


Basic Information

Item Value
gene id AMCG00010553
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 35100115 ~ 35107055 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010553
ATGTTCCAAGTCTGTCTTACTGGAGCGGCCACTGCATTGGCAGTCCTGTACACTGTGCTCTGGATTTTTTATCCCTATTTCTGGAAAGATGCAAGTTTTTGGATGAGAACCAAATCTTTCCAACGCAGGATGGGAGCTCTCGTATGTAAAGGGACTAATTCTGTGCTTTGTATCTTCAAGGAGCAAGCCCAGAAATTCCCTAGCAGGGCTTTTATCATATATGAGGATCGTGTTTACGCTTATCAAGATGTGGATAAAAGAAGCAGTAAAGTGGCCAATGTATTCCTTAAGGAGGGAGGTCTGAAGAAAGGTGACGTGGTGGCCTTGCTGATGAACAATGGACCTGATTACATCTGTCTTTGGCTGGGGTTGAGCAAGCTGGGTATCACTGTGTCGATGCTCAATGTGAATATCAGAGCCAAGTCCCTGAAGCATTGCCTCAAGATCTGCAATGCCAAAGCTCTTGTAGCTGGAGCAGATGTTCATACCTTGCTTGATAAGTTAGATGGAGCTTCAGATGCTCCTGTACCAGCTCATCTCTCAACAGTTTCAAGTATAATGGATTCAACGCTCTACCTTTTCACATCTGGGACTACAGGCTTACCAAAGGCAGCGATTATATGTCACAGAAGAGCCTTGATCATCATGCACCTCTTATTCCAGGTTGGGGCAACTAAAGATGAAGTAGTGTATGTTCCTCTTCCGCTGTTCCACTTGACCGGCCTTATCGGTGTTGGAGGATGCATTGTGATGGGAGCAGCATGTGCGGTGAGGAAGAAGTTCTCCGTGAGCCAGTTCTGGGATGACTGTAGGAAATATGATGTTTCCATGATCACGTATATTGGAGAAGTGTGTCGTTACCTGTGCAGTCCTCCCAAGCTGGTGTGCCCATTTGAATTTTTCAAATATGACGTGGTTAAAGATGAAGTAGTTCGAGATGAGAACGGCagatgcattaaattaaaaaagGTTACAAAGTTAAATCCATTTTTGGGCTATGCTGGGGACCTAGAACAAACTGAAAAGAAGCTGATGAGGAATTGTCTGGAGGAAGGAGATGTGTACTTCAACTCAGGAGACCTACTGAGAGTGAACAAGGAGAATTTTGTTTACTTCTGTGACAGGGTTGGAGACGCCTTCAGATGGAAAGGTGAAAATGTTTCCACGACAGAAGTAACAGAAATATTGGGGCAAGTGGATTTTATACAGGAAGCTAATGTTTTTGGAGTAGCTGTACCAGggttCGAAGGCAGGATCGGAATGGCTGCTTTAGTCCTAAAACAGCAGCAAGCATTTGATGGCAAGAAAGTATATGACACCGTTGTAGATCTGCCTGCTTATGCCAGGCCATTCTTTCTGAGGATACAGGAGACCATGGACATTACTGAAACTTTCAAGCACAAGAAAGTTCACCTCCGAAATGAAGGTTTCAATCCAGATACTGTTTCTGACCCGCTTTATGTGTTGGATAACTACAGTAAATCTTACGAACCCATGACTAAAGGGATATATGAAGAGATCATTTCTGGAAAGTTGAAGTTGTGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010553 True 1545 mRNA 0.44 9 35100115 35107055

Neighbor

gene id symbol gene type direction distance location
AMCG00010548 NA coding upstream 96227 34962348 ~ 35003888 (+)
AMCG00010550 NA coding upstream 168960 34930547 ~ 34931155 (+)
AMCG00010547 NA coding upstream 195753 34903503 ~ 34904362 (+)
AMCG00010546 prrc1,LOC107572184 coding upstream 242594 34847908 ~ 34857521 (+)
AMCG00010544 NA coding upstream 315452 34769669 ~ 34784663 (+)
AMCG00010552 NA coding downstream 14559 35121614 ~ 35139130 (+)
AMCG00010551 isoc1 coding downstream 35511 35142566 ~ 35149632 (+)
AMCG00010557 NA coding downstream 75876 35182931 ~ 35183883 (+)
AMCG00010555 NA coding downstream 82328 35189383 ~ 35193509 (+)
AMCG00010556 adamts19 coding downstream 109163 35216218 ~ 35250157 (+)
G81583 NA non-coding upstream 49503 35050405 ~ 35050612 (+)
G81582 NA non-coding upstream 60648 35039257 ~ 35039467 (+)
G81581 LOC108412713 non-coding upstream 82983 35016909 ~ 35017132 (+)
G81580 NA non-coding upstream 83781 35016075 ~ 35016334 (+)
G81577 fbn2 non-coding upstream 86461 35012955 ~ 35013654 (+)
G81675 NA non-coding downstream 555108 35662163 ~ 35666680 (+)
G81707 NA non-coding downstream 595634 35702689 ~ 35704527 (+)
G81710 NA non-coding downstream 600462 35707517 ~ 35713953 (+)
G81812 NA non-coding downstream 1037783 36144838 ~ 36145081 (+)
G81814 NA non-coding downstream 1040488 36147543 ~ 36148008 (+)
G81576 NA other upstream 87422 35012315 ~ 35012693 (+)
AMCG00010545 megf10 other upstream 254239 34756519 ~ 34845876 (+)
G81496 NA other upstream 392721 34701438 ~ 34707394 (+)
AMCG00010529 NA other upstream 1161878 33903815 ~ 33938237 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other upstream 2569849 32474033 ~ 32530266 (+)
AMCG00010562 NA other downstream 363280 35470335 ~ 35477590 (+)
AMCG00010563 cdc42se2 other downstream 373745 35480800 ~ 35526224 (+)
AMCG00010578 NA other downstream 970058 36077113 ~ 36079892 (+)
AMCG00010585 NA other downstream 984484 36091539 ~ 36094497 (+)
G81971 NA other downstream 2123373 37230428 ~ 37251169 (+)

Expression


Co-expression Network