AMCG00010555


Basic Information

Item Value
gene id AMCG00010555
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 35189383 ~ 35193509 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010555
atgggGTTCATTCAGCTGAATGAGGATTTCCTATTTATTGAACCTCTGAATCACACACTAGCGGTAACAGGTCATGCTCACCGTGTGTACAGAAGAAAGCGGTCAATGGAGGAGAAGACAGAAAGACCGGCGACGCACAGCTACTGTGGAGTCTTCCCTGagaaacagaaaaataaaaaccgaaAAGTAACAGAAAGCAGAAGACGGAAAAGATACTCCTACAAATTACCTCATGAATACAACGTGGAGACCTTAGTGGTTGCTGATCCGGCCATGGTCAGTTACCATGGAGCAGAAGCTGCAAAGAGGTTCATTCTCACAATTATGAATATG

Function

GO: NA

KEGG:

id description
ko05217 Basal cell carcinoma

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010555 True 333 mRNA 0.44 2 35189383 35193509

Neighbor

gene id symbol gene type direction distance location
AMCG00010557 NA coding upstream 5500 35182931 ~ 35183883 (+)
AMCG00010551 isoc1 coding upstream 39751 35142566 ~ 35149632 (+)
AMCG00010552 NA coding upstream 50253 35121614 ~ 35139130 (+)
AMCG00010553 NA coding upstream 82328 35100115 ~ 35107055 (+)
AMCG00010548 NA coding upstream 185495 34962348 ~ 35003888 (+)
AMCG00010556 adamts19 coding downstream 22709 35216218 ~ 35250157 (+)
AMCG00010559 NA coding downstream 57327 35250836 ~ 35257291 (+)
AMCG00010558 chsy3,LOC104965884 coding downstream 68458 35261967 ~ 35265386 (+)
AMCG00010560 chsy3,LOC107573232,LOC107665461 coding downstream 170201 35363710 ~ 35365281 (+)
AMCG00010564 sptlc1 coding downstream 350540 35544049 ~ 35554999 (+)
G81586 NA non-coding upstream 86799 35102352 ~ 35102584 (+)
G81583 NA non-coding upstream 138771 35050405 ~ 35050612 (+)
G81582 NA non-coding upstream 149916 35039257 ~ 35039467 (+)
G81581 LOC108412713 non-coding upstream 172251 35016909 ~ 35017132 (+)
G81580 NA non-coding upstream 173049 35016075 ~ 35016334 (+)
G81675 NA non-coding downstream 468654 35662163 ~ 35666680 (+)
G81707 NA non-coding downstream 509180 35702689 ~ 35704527 (+)
G81710 NA non-coding downstream 514008 35707517 ~ 35713953 (+)
G81812 NA non-coding downstream 951329 36144838 ~ 36145081 (+)
G81814 NA non-coding downstream 954034 36147543 ~ 36148008 (+)
G81576 NA other upstream 176690 35012315 ~ 35012693 (+)
AMCG00010545 megf10 other upstream 343507 34756519 ~ 34845876 (+)
G81496 NA other upstream 481989 34701438 ~ 34707394 (+)
AMCG00010529 NA other upstream 1251146 33903815 ~ 33938237 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other upstream 2659117 32474033 ~ 32530266 (+)
AMCG00010562 NA other downstream 276826 35470335 ~ 35477590 (+)
AMCG00010563 cdc42se2 other downstream 287291 35480800 ~ 35526224 (+)
AMCG00010578 NA other downstream 883604 36077113 ~ 36079892 (+)
AMCG00010585 NA other downstream 898030 36091539 ~ 36094497 (+)
G81971 NA other downstream 2036919 37230428 ~ 37251169 (+)

Expression


Co-expression Network