AMCG00010556 (adamts19)


Basic Information

Item Value
gene id AMCG00010556
gene name adamts19
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 35216218 ~ 35250157 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010556
ATGGGCGTAAATCACGACAATGACCACCCATCCTGTGCGGACAGCCTCCATATCATGTCTGGAGAGTGGATCAAAGGCCAGAACCTTGGCGATGTCTCCTGGTCTCAGTGCAGCAGGGAGGATGTTGAAAGGTTCCTCAGGTCGAAGGCGAGCAGTTGCTTGTTGCAGACCGATCCTATGAGCCTCAACTCTGTGATCCTGCCCTCTAAACTGCCTGGGATGACATACACGGCCGACGAGCAGTGCCAGATACTGTTTGGGCCCAAGGCATCTTTCTGTCACAAAATGCAGCACGTCATTTGCTCTGGGCTGTGGTGCCGAGTGGAAGGGGAGAAGGAGTGTAAGACCAAGCTTGACCCCCCATTGGATGGAAGTGAATGTGACATGGGAAAGTGGTGCCGAGCGGGCGAGTGTGTAAGCCGGGCCCTCCTGCCCGAGCACACACATGGAGAGTGGAGTTCCTGGGGGCCCTGGGGAGCCTGCAGCCGGACCTGCAGCACGGGGATCATTGCTCGGCAACGCAAGTGTGACAATCCCAGACCCAGTGCTAAAGGGAGGGACTGCCCTGACTCCAGGATGCAGTATAAAGTGTGTGAGAATGTGCCCTGTCCGGCGGGAGTGCCTGCCTTCAGGGACCTGCAGTGCCAGACTTTCAACCGGCCGTCCTTTCAGAAGCACGCCCTCCACTGGTACTCTGTAATGGACGATGAGAAACCCTGCACCTTGTTCTGTTCCACGTCTGGGAAGGAGCAACCGGTGCTCTTAGCAGAGAAAGTGCTGGATGGGACATCTTGTGGCCCTCAGGAGTCTGGGATCTGTGCTAATGGGACGTGTCAGAAAGTGGGCTGTGATGGCATTCTTGGATCCTCTTCCAGGGAAGACCATTGTGGCATCTGCAATGGAAACGGGAAGTCATGCAAAGTCATCAAAGGAGACTTCAACCACACCAGAGGAGCAGGTTATGTTGAAGCCGTGGTCATACCTGCAGGGGCAAGACGAATCAAAGTAGTGGAAGAGAAGCCGGCCCATAGCTATTTAGCACTTCGAGATGCCAGCAAGCAGTCCATCAACAGCGACTGGAAGATTGAGCACCCCGGTTCCTTTAACATCGCTGGCACAACGGTCCATTATGTCAGAAGGGGATTGTGGGAGAAAATCTCTGCGAAAGGCCCCACTACTTCACCTTTACATCTTTTGGTGCTGCTGTTCAATGACCAGAATTATGGCATCCATTACGAGTACACCATCCCCACGGAGCCCCTGCCCGAGAACCAGAGCAGCAAGGCCTCGGAGGCGCTCTTCATGTGGACGCACTCGGGCTGGGAGGACTGCCATGCCATGTGTGGTGGAGGGGAAAGAAAGACAATAGTGTCCTGCACCAAGATCCTGAACAAGACAACCAGTGTGGTAGACAACCGGAGGTGCCGCCACCTGACCAAACCTGAGCCCCAAGTACGCAAGTGTAACGATCAACCCTGCCAGACCAGGTGGATGATGACAGAGTGGACCACTTGCTCCAGGACGTGTGGAAAGGGATCTCAGGGCAGACAGGTGGCCTGTACACAGCAGCTCCCCAACGGCACTCTCATCAAGGCCAAAGACAGAGACTGTGCTGGTCCCAAACCTACGTCCACCCAGCGTTGTGAGGGACAGGACTGTATGACCGTGTGGGAGGCAGGAGTGTGGTCTGAGTGCTCCGTGAAGTGCGGCAAAGGGGCCCGCCACCGCAGCGTGAAGTGCACCAACCCCCGCAGGAAGTGTGACCTGTCCACGCGGCCCCGCGAGGTGGAGGACTGCGAGGACTACTCCAAATGCTACGTCTGGAGAACAGGAGACTGGTCCAAGGTTTGCTCGGTCACCTGTGGGAAGGGGATGCAGTCCAGGGTGATTCAGTGTATGCACAAGATCACAGGTCGACACGGCAATGAATGCTTCTCTTCGGAGAAACCCGCGGCCTACAGACCCTGCCACCAGCAGCCCTGCAACGAGAAAGTGAATGTGAACACCATTACCTCCCCAAGACTAGCTGCCTTAACGTTCAAGTGCCTGCGAGACCAGTGGCCGGTGTACTGTAAAGTAATACGAGAGAAGAACCTGTGCCAGGACATGCGATGGTACCAGCGCTGCTGTGAGACCTGTAGAGACTTTTACGCACAGAAAATGCAGCAGAAGAGTTGACAACAGTGTACACACGCAACATAAACCCcaaatttatttatattaactaAATGCACACAAATGAAACCAATACTTTCCCACCAGGTAATTTAATTGGTGTAATTTATTCTTATACTCTGTGTTTCAGATATGTCTGTGGAAAAACACAATATGTTTTACactaaatgtgcatttttttgtaatcaatGTCACTTTTGGAAGCAATGTTCACTGTGTCTGAAAGTAATGGAGCGACTCACGATGCCACCACAGTGTCTATACTGTACAGATGACACATGAAATGGAAATGCATCTTGGACTGGGTATTACACAATTGGGTGCAGAGAAGAGAAATTGATGCCATTACCCCAAAGCATCTTAAACATCGTTGGTACTTATTAGGAGGACAAAATATTGCAGCTCATATCTCTGCATTAATATCACGGGGGGCTGGAGGCCTTTCGTGTTCGTTACAGTCTTGTTATTGCGACAGATTccaaatatttctgttttttctttgaagtCAACTATGCAGACTTTCTGTCCTCAAGAGCAACTActcaaacaaatatgaaataatctCTGAGTTGCATCGCAGTGGatcttattgttgttgttttttgtttttttagtgcTGATGACTAAATTGTGATTTGGGCTACAATCTATATTTCCGATATGTATGTttagaacacaaattaaatgctgCCCCTGACCACCTGATACTACTTTTAAACGTCCgctgaagctttttttttttgtctgcttcATAATAGAATATATGGTGTCTTCATCTAATCAATACTCTGTTTCACAGAAAGACTTAAGGCAATTCAATCTCTTCTCATTCTTCAAACATTTTGAGGCAAGCTTGAGGCATGTGCGAACTGGAATCCACATAAATACAATGTCTGTGCGGAGCGTctgataacatttatttaaatattatttgtaactGTCAGTTTTTCAGCTCGGTTCCCCACCATGAAGCCAACCTTGTCCTAACAGGAGGGAGATTACACACCTCGTCTGGAGTTTCAGCCAGTACTTCAAGTGGAAAGTTTTACCAATTGAGCCACTATGTTTTTTGGCGTGAATAATCTTtcggttttcattaaaaaaaaaaaaagtatattaaattCAAGTAATATCagcaatgttattatttatgacTTGATCTCTAACTTGTGAAAATGACTTTGTGCTGaggactgaaaaagaaaatgttactgAACTGAGgccaaaatactttttttgtgttaGGATGTCAGTTACAAATAGTTGACCGAATTGGCAGACAAATCTCATTTTTGTGATGGAACTGTACCGCCATCAGGTGGCTAAGTGTATGAATTGATTCATTCAGATCAAAGAAACCATTTTAGATGGTTaacataatttaacataattaaaacaccTTTTTGGTAAACACACATTCCAGGTATTGAAGCCTTAaggtttatttgaaaatatttgagaTTTGACATGGTCCTTAGCAGAGGTTTTTGTTTAGCCTTCACTTTTGCAACTTTTGCCCCAGTTCCTCATAGTAAATTGTCTCATTATTCTGTGCTTCATTTAAATGACTGTTTGTCTGCAGAGATTTGTATTTTGGATTAAATTAGTAGCATTGCAATACAAGTTAATCCAGTATCCCTTGTTTGAAGAGTGCAGTACGAATGAGCTGCGGCTGCCAAGTCATGGTTCGTTATTGCACTAGTTTAAATCACTCCCCTACAAGACTTGCCTCCCAGAGCTTGAGCTTTCAAATCTTAACAGATCAGAATGGAACTAAAGCTAATCTTTTCCTAAGAAGCCCACTGTTGTATAGATGATGTTTTGGGATTCGATTGTATTGAGCTGAACAGGTATGGAGATTATTATTAAGTGACTTATTGCAGTGTCTGTGTCCTTCACACCTCATTGCTGCCTGCTCTCAGACACAGGAACCCCAAGGAGAATGTATTTAGTTCTGCTAAAGGTTTTGATATTTTGACAGCATTTCTTCGTGCATTAATGATGTTCTAAACTCCATGATTCAATGACTGGGCTTTTAATTAACCCAATATTTAGCACACAGGATCCAAGGATGAATGAAGATTTGCATTGGTCGCTCATCACTACCGAAGGGGGCTCGCTGTGCCTCCACTCAGAACGGTTCAGGGAAAGATCCCTTTTGTTTGACGTCATAAACGGAAAACTTGAACCGTTATTCTGTTCATCTGCAGATGTTTAAGCGAAAGGGACAGCGGGAAACCACATGTTAAGCTACattgttatttacattatttatcttttcagatttctgtatttttgttttgttacaccACTTGCAgagatattattattgttcacaTTTGTCTTGGCGTCTTCTGCCACGTTTAAAGGTGCAGCAATGGTCCGAGCTGTCAGTCACACTGACCTCAGCTGCTCCACCATTGAAAGGAAAAGAATCTGCTGTatattatgaatacattcaCAGAGTATCAACACAATATTAATCTGTTGGTAGCACGTATTATCCCACAGCCTATACTTGAATAAAAGTATTTAGggacaaaacaataataataataataattaataaaaacactgtaaatgttTACACTGAATTGCTGTTGCACTGGTTTAGGCCTGAAAAGTCTTCAGTCAGGACATCTTGTGGTGCATAAATACTGCCTGGTTTTAACTTCCTGTCATTCAGTTGAAAACATGTTGAAAGCTCAAAGTATTTAATTGGTATGATATGAACATTTTACTCTTAACCAATATGCTAAGCCTAAATTTaggttgtatttttttgtttgttttgtacttccttttttgtaatttcatttttggtAAGTTTTGCTAAATGTTTGTGAAACTTTATGGGacttcagttttctttctgtgaaAATACATTCTGTACATGAGTCACA

Function

symbol description
adamts19 Predicted to enable metalloendopeptidase activity. Predicted to be involved in extracellular matrix organization. Predicted to be located in extracellular region. Predicted to be active in extracellular matrix.

NR:

description
PREDICTED: A disintegrin and metalloproteinase with thrombospondin motifs 19

GO: NA

KEGG:

id description
K08633 ADAMTS19; a disintegrin and metalloproteinase with thrombospondin motifs 19

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010556 True 5078 mRNA 0.45 15 35216218 35250157

Neighbor

gene id symbol gene type direction distance location
AMCG00010555 NA coding upstream 22709 35189383 ~ 35193509 (+)
AMCG00010557 NA coding upstream 32335 35182931 ~ 35183883 (+)
AMCG00010551 isoc1 coding upstream 66586 35142566 ~ 35149632 (+)
AMCG00010552 NA coding upstream 77088 35121614 ~ 35139130 (+)
AMCG00010553 NA coding upstream 109163 35100115 ~ 35107055 (+)
AMCG00010559 NA coding downstream 679 35250836 ~ 35257291 (+)
AMCG00010558 chsy3,LOC104965884 coding downstream 11810 35261967 ~ 35265386 (+)
AMCG00010560 chsy3,LOC107573232,LOC107665461 coding downstream 113553 35363710 ~ 35365281 (+)
AMCG00010564 sptlc1 coding downstream 293892 35544049 ~ 35554999 (+)
AMCG00010566 ror2,LOC102784735,LOC107720387 coding downstream 353981 35604138 ~ 35612541 (+)
G81586 NA non-coding upstream 113634 35102352 ~ 35102584 (+)
G81583 NA non-coding upstream 165606 35050405 ~ 35050612 (+)
G81582 NA non-coding upstream 176751 35039257 ~ 35039467 (+)
G81581 LOC108412713 non-coding upstream 199086 35016909 ~ 35017132 (+)
G81580 NA non-coding upstream 199884 35016075 ~ 35016334 (+)
G81675 NA non-coding downstream 412006 35662163 ~ 35666680 (+)
G81707 NA non-coding downstream 452532 35702689 ~ 35704527 (+)
G81710 NA non-coding downstream 457360 35707517 ~ 35713953 (+)
G81812 NA non-coding downstream 894681 36144838 ~ 36145081 (+)
G81814 NA non-coding downstream 897386 36147543 ~ 36148008 (+)
G81576 NA other upstream 203525 35012315 ~ 35012693 (+)
AMCG00010545 megf10 other upstream 370342 34756519 ~ 34845876 (+)
G81496 NA other upstream 508824 34701438 ~ 34707394 (+)
AMCG00010529 NA other upstream 1277981 33903815 ~ 33938237 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other upstream 2685952 32474033 ~ 32530266 (+)
AMCG00010562 NA other downstream 220178 35470335 ~ 35477590 (+)
AMCG00010563 cdc42se2 other downstream 230643 35480800 ~ 35526224 (+)
AMCG00010578 NA other downstream 826956 36077113 ~ 36079892 (+)
AMCG00010585 NA other downstream 841382 36091539 ~ 36094497 (+)
G81971 NA other downstream 1980271 37230428 ~ 37251169 (+)

Expression


Co-expression Network