AMCG00010569 (auh,LOC107720385)


Basic Information

Item Value
gene id AMCG00010569
gene name auh,LOC107720385
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 35719235 ~ 35731357 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010569
caGCATGGCGGTCCTTGCTGGGTGCAGAGTCCTATCGCGGACATTTCGACGTGCTTCGTTAGGTCCCAGCTTGGAGGGGTCTTGCAGGTTGCAGCTGCATGCGAAATACGTGTACTGTAATTTCCGTACCAGCGAGCCGCAGAGATGCCGAGGAGGGGGCTACGGATCGGGGCGACATTACAGCTCAGAGGCCAAGTCGGCCGGCGGAGACGACCTGAGCGTTAGGTATTTGGATGGACAGGACTCAGgGATTGTGGTGCTTGGAATAAATAGACCAAAGGCTAAAAATGCAATAAGCAAAAACCTTGTAAAAATGATGACGGATGCTGTAGATGCAGTTAAAGTCAATAACCGTGTACGGACAGTGATCATATGCAGTCTGGTGCCTGAAATATTTTGTGCAGGTGCAGACCTAAAGGAGAGGGCAAAAATGCACCCCAGTGAAGTTGGACCCTTTGTCACCAAAGCAAGAGCCTTAATGCAGGAACTAGGTAACCTGCCTATGCCAACCATTGCTGCAATCGACGGCGCTGCTTTGGGAGGGGGGCTGGAGATGGCTTTAGCTTGTGACATCAGAATAGCT

Function

symbol description
auh Predicted to enable enoyl-CoA hydratase activity. Predicted to be involved in fatty acid beta-oxidation. Predicted to be active in mitochondrion. Human ortholog(s) of this gene implicated in 3-methylglutaconic aciduria type 1 and renal tubular transport disease. Orthologous to human AUH (AU RNA binding methylglutaconyl-CoA hydratase).

NR:

description
PREDICTED: methylglutaconyl-CoA hydratase, mitochondrial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010569 True 583 mRNA 0.51 5 35719235 35731357

Neighbor

gene id symbol gene type direction distance location
AMCG00010570 NA coding upstream 17739 35700661 ~ 35701496 (+)
AMCG00010566 ror2,LOC102784735,LOC107720387 coding upstream 106694 35604138 ~ 35612541 (+)
AMCG00010564 sptlc1 coding upstream 164236 35544049 ~ 35554999 (+)
AMCG00010560 chsy3,LOC107573232,LOC107665461 coding upstream 353954 35363710 ~ 35365281 (+)
AMCG00010558 chsy3,LOC104965884 coding upstream 453849 35261967 ~ 35265386 (+)
AMCG00010568 auh coding downstream 15180 35746537 ~ 35751114 (+)
AMCG00010572 diras2,LOC107560410,LOC107670053,LOC107736992,LOC107702570 coding downstream 71867 35803224 ~ 35808390 (+)
AMCG00010574 NA coding downstream 211490 35942847 ~ 35944273 (+)
AMCG00010579 NA coding downstream 254565 35985922 ~ 35988965 (+)
AMCG00010582 NA coding downstream 364367 36095724 ~ 36097051 (+)
G81710 NA non-coding upstream 5282 35707517 ~ 35713953 (+)
G81707 NA non-coding upstream 14708 35702689 ~ 35704527 (+)
G81675 NA non-coding upstream 52555 35662163 ~ 35666680 (+)
G81586 NA non-coding upstream 616651 35102352 ~ 35102584 (+)
G81583 NA non-coding upstream 668623 35050405 ~ 35050612 (+)
G81812 NA non-coding downstream 413481 36144838 ~ 36145081 (+)
G81814 NA non-coding downstream 416186 36147543 ~ 36148008 (+)
G81880 NA non-coding downstream 896544 36627901 ~ 36628706 (+)
G81954 NA non-coding downstream 1381618 37112975 ~ 37113181 (+)
G81983 NA non-coding downstream 1520810 37252167 ~ 37253628 (+)
AMCG00010563 cdc42se2 other upstream 193011 35480800 ~ 35526224 (+)
AMCG00010562 NA other upstream 241645 35470335 ~ 35477590 (+)
G81576 NA other upstream 706542 35012315 ~ 35012693 (+)
AMCG00010545 megf10 other upstream 873359 34756519 ~ 34845876 (+)
G81496 NA other upstream 1011841 34701438 ~ 34707394 (+)
AMCG00010578 NA other downstream 345756 36077113 ~ 36079892 (+)
AMCG00010585 NA other downstream 360182 36091539 ~ 36094497 (+)
G81971 NA other downstream 1499071 37230428 ~ 37251169 (+)
G81987 NA other downstream 1529967 37261324 ~ 37264049 (+)
G82192 NA other downstream 2154863 37886220 ~ 37888163 (+)

Expression


Co-expression Network