AMCG00010591 (LOC108425194,LOC108277218,LOC107602252,LOC107709189,LOC107704125)


Basic Information

Item Value
gene id AMCG00010591
gene name LOC108425194,LOC108277218,LOC107602252,LOC107709189,LOC107704125
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 36299973 ~ 36301141 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010591
TCTACCCAGATTAAAACGTACTCCTGGGACAACGCTCAGGTTATCCTTGCTGGGAACAAGTGTGACATGGAAGAGGAGCGGGTGGTGGCCGCGGAGAGCGGGAGGCGGTTAGCTGAGCAGCTCGGATTTGAGTTCTTCGAGACGAGTGCGAAAGACAACATCAATGTTAAACAGACATTTGAGCGCCTTGTGGACATCATCTGTGACAAGATGTCGGAGACCCTCGATACCGACCCCGCGGTCAGCGCCGGGACCCAGAACACGAGACTAACGGACAATCCCCCGCCTCTACAGCAGCCGACCTGTGGCTGTTAA

Function

NR:

description
PREDICTED: ras-related protein Rab-3C-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010591 True 315 mRNA 0.56 2 36299973 36301141

Neighbor

gene id symbol gene type direction distance location
AMCG00010590 rab3c,LOC107599832,LOC107700568 coding upstream 7634 36274916 ~ 36292339 (+)
AMCG00010589 NA coding upstream 43371 36256231 ~ 36256602 (+)
AMCG00010584 NA coding upstream 160539 36128829 ~ 36139434 (+)
AMCG00010583 NA coding upstream 191930 36101408 ~ 36108043 (+)
AMCG00010582 NA coding upstream 202922 36095724 ~ 36097051 (+)
AMCG00010598 NA coding downstream 353373 36654514 ~ 36677036 (+)
AMCG00010601 zswim6,LOC108425190,LOC107704169 coding downstream 440344 36741485 ~ 36770547 (+)
AMCG00010603 NA coding downstream 541902 36843043 ~ 36856935 (+)
AMCG00010604 LOC108425189,LOC107554527,LOC107706776,LOC108276927 coding downstream 574585 36875726 ~ 36896641 (+)
AMCG00010605 ipo11 coding downstream 603241 36904382 ~ 36915990 (+)
G81814 NA non-coding upstream 151965 36147543 ~ 36148008 (+)
G81812 NA non-coding upstream 154892 36144838 ~ 36145081 (+)
G81710 NA non-coding upstream 586020 35707517 ~ 35713953 (+)
G81707 NA non-coding upstream 595446 35702689 ~ 35704527 (+)
G81675 NA non-coding upstream 633293 35662163 ~ 35666680 (+)
G81880 NA non-coding downstream 326760 36627901 ~ 36628706 (+)
G81954 NA non-coding downstream 811834 37112975 ~ 37113181 (+)
G81983 NA non-coding downstream 951026 37252167 ~ 37253628 (+)
G81990 NA non-coding downstream 965621 37266762 ~ 37267347 (+)
G82053 NA non-coding downstream 1149980 37451121 ~ 37455288 (+)
AMCG00010585 NA other upstream 205476 36091539 ~ 36094497 (+)
AMCG00010578 NA other upstream 220081 36077113 ~ 36079892 (+)
AMCG00010563 cdc42se2 other upstream 773749 35480800 ~ 35526224 (+)
AMCG00010562 NA other upstream 822383 35470335 ~ 35477590 (+)
G81576 NA other upstream 1287280 35012315 ~ 35012693 (+)
G81971 NA other downstream 929287 37230428 ~ 37251169 (+)
G81987 NA other downstream 960183 37261324 ~ 37264049 (+)
G82192 NA other downstream 1585079 37886220 ~ 37888163 (+)
G82236 NA other downstream 1868015 38169156 ~ 38169531 (+)
AMCG00010648 NA other downstream 1945880 38247021 ~ 38252010 (+)

Expression


Co-expression Network