AMCG00010598


Basic Information

Item Value
gene id AMCG00010598
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 36654514 ~ 36677036 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010598
ATGGATGAGAACGGCTTCACTCTGGGAACGGGTGCACAGGGAGAAGAAAAGGGATTCATCACGGCAACTAATGCCTGGTTTCCATCTGCTCTTGAGATGGAGGCCATCAACTGCGGCTGCCTGCAGGGGAAGCGAAATAATGGGGAAAACTGGCAGACCATTCGAGCAAGGAAGATAGTGGAGGCAAGGAATCCAGAGGAATATGCATATCAAGAAGGGAGCATTCCCTCTGAATGGGATGCCTGGATTCGAGGAAGAAGGAAGGACCCACCTACAATTGAGGAACTTCTGAAGAACGAACGCTACCGGCAGAATATCAAGTTTCTTGCCAAGGAAGTGGAGGAAAGGGAGATGGTGCTCCAGGCCCAGGAGTACAAGGAAGGGCTGGTGGCCCAACCCCCGCAGACGCAGATCGCAGGGCACGCCTCGGCACCAAACTACGGCGAGGCGGCGCCCAGCCAGGACCCGGTCAGCACCGCCAACGCGTTCGAGCCCGGGGCCTGGAAACCCTCTGCGGGCGACACCAAGGCCTAG

Function

GO: NA

KEGG:

id description
K18160 NDUFAF2; NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 2

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010598 True 534 mRNA 0.57 5 36654514 36677036

Neighbor

gene id symbol gene type direction distance location
AMCG00010591 LOC108425194,LOC108277218,LOC107602252,LOC107709189,LOC107704125 coding upstream 353373 36299973 ~ 36301141 (+)
AMCG00010590 rab3c,LOC107599832,LOC107700568 coding upstream 362175 36274916 ~ 36292339 (+)
AMCG00010589 NA coding upstream 397912 36256231 ~ 36256602 (+)
AMCG00010584 NA coding upstream 515080 36128829 ~ 36139434 (+)
AMCG00010583 NA coding upstream 546471 36101408 ~ 36108043 (+)
AMCG00010601 zswim6,LOC108425190,LOC107704169 coding downstream 64449 36741485 ~ 36770547 (+)
AMCG00010603 NA coding downstream 166007 36843043 ~ 36856935 (+)
AMCG00010604 LOC108425189,LOC107554527,LOC107706776,LOC108276927 coding downstream 198690 36875726 ~ 36896641 (+)
AMCG00010605 ipo11 coding downstream 227346 36904382 ~ 36915990 (+)
AMCG00010608 ipo11 coding downstream 327349 37004385 ~ 37009695 (+)
G81880 NA non-coding upstream 25808 36627901 ~ 36628706 (+)
G81814 NA non-coding upstream 506506 36147543 ~ 36148008 (+)
G81812 NA non-coding upstream 509433 36144838 ~ 36145081 (+)
G81710 NA non-coding upstream 940561 35707517 ~ 35713953 (+)
G81707 NA non-coding upstream 949987 35702689 ~ 35704527 (+)
G81954 NA non-coding downstream 435939 37112975 ~ 37113181 (+)
G81983 NA non-coding downstream 575131 37252167 ~ 37253628 (+)
G81990 NA non-coding downstream 589726 37266762 ~ 37267347 (+)
G82053 NA non-coding downstream 774085 37451121 ~ 37455288 (+)
G82059 NA non-coding downstream 820706 37497742 ~ 37498116 (+)
AMCG00010585 NA other upstream 560017 36091539 ~ 36094497 (+)
AMCG00010578 NA other upstream 574622 36077113 ~ 36079892 (+)
AMCG00010563 cdc42se2 other upstream 1128290 35480800 ~ 35526224 (+)
AMCG00010562 NA other upstream 1176924 35470335 ~ 35477590 (+)
G81576 NA other upstream 1641821 35012315 ~ 35012693 (+)
G81971 NA other downstream 553392 37230428 ~ 37251169 (+)
G81987 NA other downstream 584288 37261324 ~ 37264049 (+)
G82192 NA other downstream 1209184 37886220 ~ 37888163 (+)
G82236 NA other downstream 1492120 38169156 ~ 38169531 (+)
AMCG00010648 NA other downstream 1569985 38247021 ~ 38252010 (+)

Expression


Co-expression Network