AMCG00010626


Basic Information

Item Value
gene id AMCG00010626
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 37482438 ~ 37494740 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010626
ATGACCTCTGGCAGCAAACCAGGGAAGTGTGGGGCGAAGAAGGTTCTCCTCACGGACACTGGACATACACTGGTCGACGCGTCTCCCGCCCTGCAGCACAGGGGCTCTTTGTACAAAGATCAGGATTCGTGGTCCGTGGCATTTGAGCACTGCAAAGGAAAATCACAGTCGCCGATTAACATTGACACCAGAAAAGCCTTATTTGACCCGATGCTCCCGGAGATAGTCCTGGAAGGATATGATCTATCAGACACCAAATCTCTGAAGTTACAGAACAATGGCCACACATTGCAGCTGAGTCTGCCCAACACCCTGCGCATCGTCCGGGGCTTCGACACAGTGTTCATCGCTGCGCAGCTTCATTTCCACTGGGGGACCAAGGAGGATCCGGGGTCAGAGCACACCATTGATAATATCCATGTGGTTCACTACAACTCCAAATACGCAAACCTCTCCGAAGCTGCGAGCAAGGCCGACGGGCTGGCAGTGTTGGGGGCTTTCATCGGGATTGGGCTGCACGAAAATGAAAACTACGAGAATATCCTTTCTGTCCTAAAAGATGTCAGTATAGAAGAGACGGACACTGAGATTCCTGGCTTCAATGTTCGCCATCTTCTGCCCCCAAACCTGCAACGTTTCTATCGTTATAACGGGTCCCTCACCACGCCGCCCTGCTTTCAGACTGTGAACTGGACCATCTTCAATGATACCATCAGAGTGTCGAGGAAACAGCTGGCAGCTCTCGAGGACACTTTGAAAGCTGAACATAATGAACTGTTGTCCAAGAACTTCAGAGCCCCACAGCTGCTCTTCGGCAGAGATGTTCAGTCATCTTTCAGGGCAGAAGTGAGCGGCTCAGGCTCCCAGCCGTCCGGAACTGGTCGCTCCGGCGGGAACAGCAGATCTATTGGTGAAGAAAATGGAGACATCCTGGCTATTGCATTTGGAGCCCTTTTCGTTGTCACTTTGATAGCGTTCATAGTTTACATGGTCCACCAACGGAAAAAGTTTTCAAGATTCACGAAGGACTCGAGGCAGAATGTCATCTACAAGCCAGCAACCAAGGAAGAGGCTTAGCCTGAAAAGACGGTGAAGACTCTGCAGTCCTGTGATCCATTGACAGAAAATGTCTCTCAGTTATGGGGGCTGTGTACAGAGTCTGAAAAGtatttgaattgcttttaattaaagacattttgtttctgtaaataataatatgaaaaaaaatgcagctagaaaaaaaacacaccttttggtcttaaaatgaacaataagAAATTCATTGTAGGCAATTATATTGTTCATATTGTCCAGGATTGTCCTCAACTTCAACTGTCATTCAAATGCGAGAGAAGCAGATATCATGAAGGCACTCCAAGAGTTCCAAAACCTTGTTTTTATAAGTatatttattactgttgttgctattgttggtggtgtttttgttgtatAATTGGTTGAATTCACGTGTGAATGGTCTTCTGGTTTGGGCGTATAATTTACCTGGATTAAGTATTTGCAATCCAGTTAACAAGATTGCTTACATCAAAGAACGCACACCAAAGTATTTCTGCTTAGTTGCCTTGCCTTGACGCCAGCAGTTAAAATCACTTTGTTTCCATTTCCAGCAAAATTTGAGTCATGTGTGGTGAGTGGCTTAAAAAAACCTCAGTCTCCAGATCCTTAAATCCTATAGACAATTCTTAATTTGCACTTTTTGGAGAGCTTTCTTTTGCAGATAAATAACCCAAAAGAAACCCCTTTACCTTAgcacacattttattgaatcaGTAGATAGTGTTTATGAAAATTGTCATTCCTGTATTCACTTCAATGAGACACTCCTGTCTTTATTACCCCACACCTACAGTGAAATAAGTGCTGACTGCACTATACTAAGGCCTAGACCTGTACAAAACTTTGACCTTCCAGTGAATCACAAAGTTCAAACCGATCActgattgcttttttattttgaaatagtaGAACGTGGCTGCTGACACTAATTTATACCACCATTGGGTGCTATTCGTGGACAGGTCAAAGCCAGGCCTCACCAGGACCGTGTTCTGTTCATGTGTCACATAATATCGTATTATATGGGTTTTTATAAGCACAAATTGAAGGCTATTTATCTTTATATTGTATAGACctatgtaatgtatgtaatactCTAAAATGTTGTGTTGTGATGCGTATTCTTGTCACCTCTGCACAGTGACAGTGCTAACTTTTCACAATCTGAGCGCCGTGCGAAGCAACTGGAAAAGAACgtttcaataaatgttttgttcaaaTTTGTCTGCcgtttgtatttcaatttcagATGAATATATACTCTTGAGATTGTCATACAACTGCTTGTGTTAAAACCTTTTGTACACAACAAAGCCTTTgactcttttaaattaaaaacagc

Function

GO: NA

KEGG:

id description
K01672 CA; carbonic anhydrase

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010626 True 2419 mRNA 0.43 12 37482438 37494740

Neighbor

gene id symbol gene type direction distance location
AMCG00010627 NA coding upstream 558 37474910 ~ 37481880 (+)
AMCG00010620 NA coding upstream 81639 37394062 ~ 37400799 (+)
AMCG00010621 NA coding upstream 89231 37388703 ~ 37393207 (+)
AMCG00010622 NA coding upstream 115946 37363078 ~ 37366492 (+)
AMCG00010615 clg13h5orf51,LOC106585203,LOC106580621,LOC105894184,LOC101465834 coding upstream 120683 37357271 ~ 37361755 (+)
AMCG00010634 ankrd55,LOC107578565 coding downstream 274039 37768779 ~ 37781102 (+)
AMCG00010635 NA coding downstream 300789 37795529 ~ 37809247 (+)
AMCG00010636 NA coding downstream 370322 37865062 ~ 37873485 (+)
AMCG00010641 LOC106571427 coding downstream 466012 37960752 ~ 37971680 (+)
AMCG00010644 LOC108427269,LOC105894604 coding downstream 515319 38010059 ~ 38025329 (+)
G82053 NA non-coding upstream 27150 37451121 ~ 37455288 (+)
G81990 NA non-coding upstream 215091 37266762 ~ 37267347 (+)
G81983 NA non-coding upstream 228810 37252167 ~ 37253628 (+)
G81954 NA non-coding upstream 369257 37112975 ~ 37113181 (+)
G81880 NA non-coding upstream 853732 36627901 ~ 36628706 (+)
G82059 NA non-coding downstream 3002 37497742 ~ 37498116 (+)
G82056 NA non-coding downstream 4377 37499117 ~ 37520738 (+)
G82061 NA non-coding downstream 15491 37510231 ~ 37510832 (+)
G82057 NA non-coding downstream 31343 37526083 ~ 37533144 (+)
G82063 NA non-coding downstream 59713 37554453 ~ 37556601 (+)
G81987 NA other upstream 218389 37261324 ~ 37264049 (+)
G81971 NA other upstream 231269 37230428 ~ 37251169 (+)
AMCG00010585 NA other upstream 1387941 36091539 ~ 36094497 (+)
AMCG00010578 NA other upstream 1402546 36077113 ~ 36079892 (+)
AMCG00010563 cdc42se2 other upstream 1956214 35480800 ~ 35526224 (+)
G82192 NA other downstream 391480 37886220 ~ 37888163 (+)
G82236 NA other downstream 674416 38169156 ~ 38169531 (+)
AMCG00010648 NA other downstream 752281 38247021 ~ 38252010 (+)
AMCG00010655 NA other downstream 853538 38348278 ~ 38353962 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other downstream 872929 38367669 ~ 38372651 (+)

Expression


Co-expression Network