AMCG00010635


Basic Information

Item Value
gene id AMCG00010635
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 37795529 ~ 37809247 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010635
CGGGAATCAAGGCAGGCTCTTGTGATCATCAGTTACAGTTTTCTGGGAATAACCATCGCCTTTCCAGAAGGCTTGGTATTCGGCCCCTTATTCTAAACAGCACTGAGGTTTTAAACCCATAATACTCAAATTTCACTGCAGGAGAGAGTTCAGCTTTAAAGTAAAATGGAAAGTATGTAGAGGGACTTTGTCTTATTCTTAAATCATCATCTTTCTTTTTAGAGATGTCGGTGACCATATGCAAGATGACTTTTGGGGAGAAGATACTGCTGCTACTCCTTTTGACTCCAGTCTTCATTCTTTGTGCTATGGCTGGGATTACCGGTGGGAGGATTTACCCCGAGTCGCCGGTGCTGGAACTGAACACACAATTCACGGCCATTTGTGTCATGTCGAAACCTTTCATGGACCTCTCCAAGGCCACGGCTGATGATGTCTTCTGGAAGTTCAGAACGCACAAAGCGCCACGGGAGCTCTACACCAAGATCAATAGCTCGGCAGTCAGCATAACCGTCAACGTCACCAGGCAGCTGGAGAGCCCTCTCACCTGTAACGTTTTTGAATGGAGTCAGGTGCCGCAGAACGTTTATGGGATTTTCTTTACGGTGGGATACCCTCCCGAGACTCCTCGGAATATTACCTGTATGGTCCACCAGGTGAATTACAAGAGTCTGTCGCGGTCCATGCAGTGCTCCTGGGACCCTGGGAGCAGAGACCCCATACTGAACACCAGCTACAGCCTGTGTGCTACACAACATGAGTTTGTGACGTTGAGGCACCCATCTCAGAACAACACCGGCGAGCTGTCCTTCAAAGTCATGCCGGTTTTTGTTGTAGTGGTTGTGTGGGTAGAAGCCCAGAACCAGCTGGGGATAGCCGTGTCCGAAAAAATAACGCTGGATCCAGTAGAGATTGTGAAAACATTCCCACCCAAGGAGCCTGAGGTGATTTCTGAGGCGATGTTTCCGAGATCGCTGCTGGTCAAGTGGAAGCACCCAATCGATCCCTATATTATCGAGCTGGAGTACCACATCCGATACTGCGCCGCGGCCTCGGCGGTCCCTGAGTCTGACACGGACAGCTCCATCGAGTCCTTCAGACAGCAGGGCCTGACACCTTTCACCGAGTATGTCTTTCAAGTGaggtgcaaaaataaaaatatagaccATGGGTACTGGAGCGACTGGAGCCACAACGTCACCGGCAAGACACCAGAAGACAATCCCACGGACAAGCCAGATCTGTGGCGAGAGATCCAGCAAAGTGCCGACTCGGAGGAGACACTGGTCCGGCTGTTGTGGAAGGAGCCTCGTTCCGCTAATGGAAATATACTGAGATATGAAGTAAAATGGAAGCAACTGAACgcagaagaaaacaatgtcaCTGTTGTCAACGACACGAGCGTGGTCATTGCACTGCGCAGCCACCGGGACTACAGTGTCGGCGTGACAGCGTTCAACTCGAAGGGGCCGTCGCCCACAGCATCCCTGATCATCCCCAAGATAAAGAACGAGCACTCGCTGGGGGTGCAGCTCCACTGGTCCCTCAGAGAGAAGAAGGTGTGGGTCGGGTGGACGCCGCCGCGACGGACGGTAAAGGAGTACGTGATTGAGCGCAAGTCCCTGATCGATGGGGCCGTGGACTGGCAGCGTGAACCGAACAACAGCACCGGATCCTTTATAAAGGATCTGGAGAAATTCAAGCCGTACCTCATATCGGTCTATCCGGTGTCTGGGGGGAGGCCAGGAACCCACAGCTCTGTGGAAGTGTACCTGGAGCAAGGCCGTCCTTCTGTGGGTCCCACCGTCTCGGCGAGGAAGATGGGTAAAAACGACGCCGAGCTGGAGTGGAAAACGATCCCGGTGGAGAAGCGCAACGGGTTCATCACAAACTACACCATCATCTACAAGGCCGACGGGGGAGTCGAAAAGGTGATCCCCGTTGGCCCTGATACCCACATGTACACGCTAAGATCGCTGTCGAGTAACACGGTGTACACGGTTCACATAATGGCCTTCACCGAAGCCGGAGCCACAAACGGCACCAGCTACTCCTTCCCAACCAAGAAGTACGCACCTGGAGAGATCGAGGCCATGGTGGTGCCCATCTGCATCGGGTTCCTGTTTCTGACCGTGCTGATCGTGCTGTTCTGCATCAACAAGAAGGACATGATTAAGAAGCATATATGGCCACAAGTACCCGATCCTTCCAATAGCACGATTGCAGACTGGTCACCTGACTCTCCGACGGTGCCGGACCCCCCCAAAGACCCGAAGGCGTGCCAGGAGGGCAGCTGGATGGACGTCAGCGTGGTGGAGATCGACTCGTACGACAAAAAGTCGATGGGCGAGGACGACAAGGCCTCCCTCTTGCTGAAGAAGGGCAAGTACCTGTCCGAGGAGCACAGCAGCGGCATCGGCGGCTCGTCCTGCATGTCGTCCCCCCGGCAGAGCGTCTCGGACAGCGACGAGGGTGACTCGGGCCAGACCACCTCCAGCACGGTGCAATACTCCACCGTGGTGGCCAGCGCCTACAAGGGCCAGGTCCCGGCGCCACCCGTGTTCACGCGGTCGGAGTCCACGCAGCCGCTGCTCGACTCGGAGGAGAGGCCTGAGGAGCCGCCGCATCTCTACAGCAACCTGCGGAGCCGGGACGGCGACCGGAGGCCCTACTTCAAAAGAGACCAGACGGCCGACGGCACGCAGCCCGTCGGACTGAACCAGATCGAGATCGTGGGCCAGAATTCGGGCTCACTGGCGTTCTGCCCAGCCGAGGAGGGGAATCTGCTGGACCTGCTCACTGAGGACGCCCCTCCGCGGGCCAGGGAGACCCCCGAACTGACGCGAGGGGACAGGAATGTTGCGAAGAGCTACATGCCACAACAGAACGGCTACCGGCCACAGTGACCCGGCTGGATCCAAAACCTCAAGGATATTCACTTTCTTATCTTAAAGAAATGGAAGACGAAACATTTCCGTAGTGCCTCCGTTCATCACAGAACCATTACGTCAGATTTGGACAGAAGTTCCTCTGAATCGTAGAGGTGCATGAACTGAACGATGGATCCTTACACCATTATCACACAAATTTGAATGTTCGCAGTCTTTATATCCGACCCACGACTGATTGCTGCTGATTTTGCACCGGAGGTCCGTTACCCTTGGAAACTTGCTTCGTCTGAGAAGATTGAATCGGACGAACGTTGCGTCTTGGACGGTTCCACATTTGCACTAGTAGTAGCATCTCAGGCTTCATCTTTGGAATTTAAAAGTGTGTGCAGATCAGGATGTACAGAATGAgaccaattaaaaacatatctttAGGTTTTAAAGTCATTCACTAAGTTTGAGATTGATCATAAACATTCAATGGATGCGGATGCGGAGTTCATTATACTGACAGAACAAATTTAATGTGAATTTCCTTTTTAAGGAGTATTGGTCAGTGAataccatttttaatttataaggGGCAGTCTTACGTGTACTGAGCTCCCAATCACAGTATTTTCTTACCCGCGTGTCTGTATAATTAACTCGTAGACACAAGTTGGAAATCCAAATGCATTCCTGGGGCTGGTTGCATAAACATAAACAGTCTTGGTCTTAGTGTAATTAAGTCACGCTAATGATACTCGGTTAAAAACGTTGCATAAAATGTCCTCAGACGGGTCTTAGTCTTGATTTGAGCGACTAACTGTCAGATTGAGACTAGTCTGATATAGTTTTATGCAGCCGGCCTCAGTGCTCTTTATGTGGCTAGTCTCTCTTGTAATGTAGTTGGTAAATTGGACAAAAGTATATTCGACACTTTGGGATTGCACcaggcagttttttttaatatatatatttttaaatacttgttCATCAAACAAAGTTGAAATGCAGTCATGGAGAACAGCTGTCCACCCATGACTGTCCATCAAATGGTCTAATTGAAACGTATTCTTAGTATTACAATATTGTGGTTTCTTTGTCAAAACTTGGTCATGAATTTAATTTGGTTACATTTAAGGAATTGgtgttatttctgtttttaaccaCGCCTTTAGTTATTTGGTATAATTTTTATTAAACGGTCAACCTTGTATTGTATTGGTCACTTTGAGGACAACGTGGACAGTGATGCAGAACGCCTGTAAAAAGCATCGTCTTGAATGGCACCTGTTTATAATCGGCATAAAAAACTGAATGTAGAGCGATTTGGGTTAACTGGCACAACTGACATTGATAAGCAGGCTCTTGTCCACTCTTGGAGGAGATaagacagaataacagcctGGGCTGATTTCCTTTTAATACTGAAgtggtcattttttttatttgtttgtttaattactttataaGATGTCGTTCTATGCAACACAAGCGTGAACTTGTTCAGGGTCGTCTTAAAATATGTTCCAGCAATCATTGTTATAGCACTGGTCATATcgtcgggggggggggcagtgaagTCTAGAAAATAAAAGGTCTCTCCTAAGTGGGGAGAGAGAAGGTACAGTAGAGAGTAGGAGGGTTGGGGGACGCACGGATGGGACAGTAGGTCACATGACAAGCCCACGCATGTTTGGAGCTGCAGATGTGTGAACACCAAACGGTGTCTGCTGGAAACAcacctttacattttcattttccaagttGTAAGCTATTATGACAACTGCCGGTGATAAGTCTTTTACTTGTATTGTCTCCAGAATTGTTTGCTGTTCTTATCAAGTTGTCTTCTCTACTTTAAACCCAACACTAATATTACTGCTTTAACcaaaaagatatatatagagTTGGCATTATAGATGTTGACCAGTGTTTTGTAGCTTCTGTTCCACTGCATAGGTCTTGCCACTATTATTTTACTGAAGTAGTGCATGTCtagaatataaatgttatttttacagaaaTCCTAAACCTACAAactgtgtaataaataaaatggaagaaaatgcaTATCCAGTCACACTTGCTTCGTCTCCGTTTCCTTTTTTTCACCTCTTACTGTTCCGGTGTTGAGCGTTATAGACAAACTAAGACCAATGTGAAGATATTTTTGCAAGAAGGAACACGATGTAGCAAAGTGATGCTCTAGAT

Function

GO: NA

KEGG:

id description
K05060 IL6ST, GP130, CD130; interleukin 6 signal transducer

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010635 True 5087 mRNA 0.48 15 37795529 37809247

Neighbor

gene id symbol gene type direction distance location
AMCG00010634 ankrd55,LOC107578565 coding upstream 14427 37768779 ~ 37781102 (+)
AMCG00010626 NA coding upstream 300789 37482438 ~ 37494740 (+)
AMCG00010627 NA coding upstream 313649 37474910 ~ 37481880 (+)
AMCG00010620 NA coding upstream 394730 37394062 ~ 37400799 (+)
AMCG00010621 NA coding upstream 402322 37388703 ~ 37393207 (+)
AMCG00010636 NA coding downstream 55815 37865062 ~ 37873485 (+)
AMCG00010641 LOC106571427 coding downstream 151505 37960752 ~ 37971680 (+)
AMCG00010644 LOC108427269,LOC105894604 coding downstream 200812 38010059 ~ 38025329 (+)
AMCG00010643 NA coding downstream 234498 38043745 ~ 38050947 (+)
AMCG00010650 NA coding downstream 468070 38277317 ~ 38278369 (+)
G82140 NA non-coding upstream 51798 37743525 ~ 37743731 (+)
G82092 NA non-coding upstream 134374 37658307 ~ 37661155 (+)
G82063 NA non-coding upstream 238928 37554453 ~ 37556601 (+)
G82057 NA non-coding upstream 262385 37526083 ~ 37533144 (+)
G82061 NA non-coding upstream 284697 37510231 ~ 37510832 (+)
G82156 NA non-coding downstream 16450 37825697 ~ 37825916 (+)
G82228 NA non-coding downstream 278146 38087393 ~ 38093714 (+)
G82229 NA non-coding downstream 286374 38095621 ~ 38095902 (+)
G82230 NA non-coding downstream 287779 38097026 ~ 38097286 (+)
G82231 NA non-coding downstream 301002 38110249 ~ 38110555 (+)
G81987 NA other upstream 531480 37261324 ~ 37264049 (+)
G81971 NA other upstream 544360 37230428 ~ 37251169 (+)
AMCG00010585 NA other upstream 1701032 36091539 ~ 36094497 (+)
AMCG00010578 NA other upstream 1715637 36077113 ~ 36079892 (+)
AMCG00010563 cdc42se2 other upstream 2269305 35480800 ~ 35526224 (+)
G82192 NA other downstream 76973 37886220 ~ 37888163 (+)
G82236 NA other downstream 359909 38169156 ~ 38169531 (+)
AMCG00010648 NA other downstream 437774 38247021 ~ 38252010 (+)
AMCG00010655 NA other downstream 539031 38348278 ~ 38353962 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other downstream 558422 38367669 ~ 38372651 (+)

Expression


Co-expression Network