AMCG00010636


Basic Information

Item Value
gene id AMCG00010636
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 37865062 ~ 37873485 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010636
ATGGAAGACGATGTGAAACCGCTGCTTGCGTCCgagagagctggagagagcTATGCGGGAGCCGAGCGCAGTGTCTTGGAGTCCTTTGACCCCAGGTCTAAAAGCCACTGTCCACGCTCAAGCCATCTCCTCCCCGCCCCGCACAGGCCTTTCCACGTGGAGCCGCGCAACATCGTAGAGGAGGACGCCCAGGAGCGAGTGTCGGCCGAGGCCTCGGTGATGAGCAGCAGGGTGCACTACTACGGCCGGCTCACCGGTTCCTCGGACAGACTGCTGGTTCCTCCGGACCATGTGATCCCCGGGCCCGAGGAGATTTATGTTTACAGCCCCCTGGGGACGGCCTTCAAAGTGGAAGGAAGTGTTGATGGGTCTGGAAAGAACCCTAGCATCGTCACCATGTATGTATCCCGAACCCTCAGGCTGGCCGGGCCTGTCGCGGGATTCACGTTCGGCATTCTCATCATTGTGTCCATGGGGCTGCTGACGCTGTACTGCTGCTACAGGGTATTGAAGTCACGCGCAGCGATACCCTTTATAGATACCTCAGACTGGGAGTTTCCGGATGTTTGCCGATATTACTTCGGCGCCTTTGGCCAGTGGTCCAGTCTTGTGTTTTCCATGGTGTCCCTGATTGGGGCAATGGTTGTCTACTGGGTGCTCATGTCCAACTTCCTGTTTAATACTGGGaaatttatttacaGCATCTCAGTCCTACTTTTGGCAATTTCACCAACAGAGCGCTTTCTCTTTGCAGACTTTGCAAACAACGTCAGTGTGGCTGATTTGGAGTTTGGGACCAATGGGTCTGAAAGAGTGATCTGCCCGTTCCCCAACACGGGCCACTTGAACTGCACCGGGGACGGGTTCTCCGCCACGGACAACGGTACCGGCACTCTGTTCGACAAATGGTGGCACAAGACTAACACCATCCCCTTCTACCTGATCATCCTGCTGCTGCCCTTGCTGAATTTCAGATCGGCGTCTTTCTTCGCCAGGTTTACCTTTCTGGGGACGATATCGGTCGTCTACCTCATCGTTCTGGTGACCCTGAAAGCCGCCCGCCTGGGTTTCCATCTGGAGTTCCACTGGTTTGAGTCGACGCAGTTCTTTGTGGCAGAGTTCAGACTGCTGTTCCCGCAGCTGACTGGAGTTCTCACCCTCGCGTTCTTCATCCACAACTGTGTGATCACCCTCCTGAAGAACAACAAGGTCCAGGAGAACAACGTGAGTGCGGCCAACACCCACCCGGCTCTGACCCCTCTACCTCTCGTGCTTTTGCAGAACTTTCTGGACAACTTCCCCAGCAGTGACATCATGGTGTTTGTGGCCCGGGCCTGCCTGCTCTTCCAGATGACCACCGTGTACCCCTTACTGGGCTACCTGGTCCGAGTGCAGTTGATGGGGCAGTTCTTTGGGAATCACTACCCTAGTTTTTTCCACGTGTTCACCCTGAATTTGTTCATAGTGGCAGCAGGTGTCGTTATGGCAAAGTTTTTCCCCAACATCGGTTCCATTATCAGGTACTCCGGGGCGACTTGCGGCCTGGCCTACGTGTTTGTGTTCCCCTCCGTCATCCACATGATCTCGCTGCGGCGCGCGGGGGAGCTGCGCTGGCCCTCTGCCCTCTTCCACAGCCTGCTCATCGTGCTGGGCATCGCCAACTTGGTGGCTCAGTTCCTCATGTGA

Function

GO:

id name namespace
GO:0006811 ion transport biological_process
GO:0016020 membrane cellular_component

KEGG:

id description
K14995 SLC38A9; solute carrier family 38 (sodium-coupled neutral amino acid transporter), member 9

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010636 True 1686 mRNA 0.56 12 37865062 37873485

Neighbor

gene id symbol gene type direction distance location
AMCG00010635 NA coding upstream 55815 37795529 ~ 37809247 (+)
AMCG00010634 ankrd55,LOC107578565 coding upstream 83960 37768779 ~ 37781102 (+)
AMCG00010626 NA coding upstream 370322 37482438 ~ 37494740 (+)
AMCG00010627 NA coding upstream 383182 37474910 ~ 37481880 (+)
AMCG00010620 NA coding upstream 464263 37394062 ~ 37400799 (+)
AMCG00010641 LOC106571427 coding downstream 87267 37960752 ~ 37971680 (+)
AMCG00010644 LOC108427269,LOC105894604 coding downstream 136574 38010059 ~ 38025329 (+)
AMCG00010643 NA coding downstream 170260 38043745 ~ 38050947 (+)
AMCG00010650 NA coding downstream 403832 38277317 ~ 38278369 (+)
AMCG00010652 NA coding downstream 432769 38306254 ~ 38317804 (+)
G82156 NA non-coding upstream 39146 37825697 ~ 37825916 (+)
G82140 NA non-coding upstream 121331 37743525 ~ 37743731 (+)
G82092 NA non-coding upstream 203907 37658307 ~ 37661155 (+)
G82063 NA non-coding upstream 308461 37554453 ~ 37556601 (+)
G82057 NA non-coding upstream 331918 37526083 ~ 37533144 (+)
G82228 NA non-coding downstream 213908 38087393 ~ 38093714 (+)
G82229 NA non-coding downstream 222136 38095621 ~ 38095902 (+)
G82230 NA non-coding downstream 223541 38097026 ~ 38097286 (+)
G82231 NA non-coding downstream 236764 38110249 ~ 38110555 (+)
G82234 NA non-coding downstream 282912 38156397 ~ 38156598 (+)
G81987 NA other upstream 601013 37261324 ~ 37264049 (+)
G81971 NA other upstream 613893 37230428 ~ 37251169 (+)
AMCG00010585 NA other upstream 1770565 36091539 ~ 36094497 (+)
AMCG00010578 NA other upstream 1785170 36077113 ~ 36079892 (+)
AMCG00010563 cdc42se2 other upstream 2338838 35480800 ~ 35526224 (+)
G82192 NA other downstream 12735 37886220 ~ 37888163 (+)
G82236 NA other downstream 295671 38169156 ~ 38169531 (+)
AMCG00010648 NA other downstream 373536 38247021 ~ 38252010 (+)
AMCG00010655 NA other downstream 474793 38348278 ~ 38353962 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other downstream 494184 38367669 ~ 38372651 (+)

Expression


Co-expression Network