AMCG00010650


Basic Information

Item Value
gene id AMCG00010650
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 38277317 ~ 38278369 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010650
atggagagggggagaggacgCATGACATCAGACGCCGGCCTCCGAGGCATCTATCCCCCGCACTGCCTCTACCCGGCGGCGGCGCCGGCGCTGGAGATCCAGGAGCTGGCCTCCAAGCGGGTGGACATCCAGAAGAAGCGCTTCTACCTGGACGTGAAGCAGAGCGCCCGGGGCCGCTTCCTGAAGATCGCCGAGGTGTGGATCGGCCGCGGCCGGCACGACAACATCCGCAAGAGCAAGCTGACGCTGTCCATGGCCATGGCCCCCGACCTGCGCTACTGCCTGGGCGACTTCATCGAGTACTACGCCCACCTGGGGCTGCGGGGGGCTCAGGTGGCCCGGCCGGAGGAGCACAGCAACGGCCAGGGTCGCCAGCCCGGGGACTCCCGGAGGaggcagcggcagcagcagcagcatccccatccccatccccatccccacCATCAGCACCACCACGCAGTGCCCATCTCTCCCACCGGCTCCGCGGCGTCGGAGGAGCCCACCCACCGCGTCCTCAAGAGCGACTTCATCGAGAGGGACAACCGCAAGTACTACATGGACCTGAAGGAGAACCAGCGCGGCCGCTTCCTGCGCATCCGGCAGACGGTGAGCCGAGGACACGGCACCATCGGCTACTACGGCCAGGGCATCGAGCAGACCATCGTGCTGCCCGCCCAGGGGCTCATCGAGTTCCGCGACGCGCTCTCGCAGCTCATCGAGGACTACGGCGAGGAGGAGGCGGCGGCGGGGGAAGAGCGGGGCCGGGGGCGCAACCATGAGGAGTCGGCGGAGCTGCCCGAGGCCGTGTCGTTCCGGGTGGACAACAAGCGCTTCTACTTCGACGTGGGATCCAACAGGTACGGCGTCTTCCTGAAGATCAGCGAGGTGCGCCAGCCCTACCGCAACACCATCACCGTGCCGCTCAAGGCCTGGGCTCGCTTCGGGGACAACTTCATCCGCTACGAGGAGGAGATGCGGAGGATTTTCAACGGCCACGGCAAGGAGAAGAGGACAGAGACCCGGGCGGACAGCTGCGAGGAGCCGGAGGATTGA

Function

GO: NA

KEGG:

id description
K21800 PURG; purine-rich element-binding protein gamma

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010650 True 1053 mRNA 0.67 1 38277317 38278369

Neighbor

gene id symbol gene type direction distance location
AMCG00010643 NA coding upstream 226370 38043745 ~ 38050947 (+)
AMCG00010644 LOC108427269,LOC105894604 coding upstream 251988 38010059 ~ 38025329 (+)
AMCG00010641 LOC106571427 coding upstream 305637 37960752 ~ 37971680 (+)
AMCG00010636 NA coding upstream 403832 37865062 ~ 37873485 (+)
AMCG00010635 NA coding upstream 468070 37795529 ~ 37809247 (+)
AMCG00010652 NA coding downstream 27885 38306254 ~ 38317804 (+)
AMCG00010653 ppp2cb,LOC107758729,LOC105021738 coding downstream 47316 38325685 ~ 38339014 (+)
AMCG00010654 enoph1 coding downstream 97090 38375459 ~ 38378170 (+)
AMCG00010660 cops4,csn4,LOC106562268,LOC107685106 coding downstream 168934 38447303 ~ 38458936 (+)
AMCG00010661 NA coding downstream 190003 38468372 ~ 38474161 (+)
G82234 NA non-coding upstream 120719 38156397 ~ 38156598 (+)
G82231 NA non-coding upstream 166762 38110249 ~ 38110555 (+)
G82230 NA non-coding upstream 180031 38097026 ~ 38097286 (+)
G82229 NA non-coding upstream 181415 38095621 ~ 38095902 (+)
G82228 NA non-coding upstream 183603 38087393 ~ 38093714 (+)
G82250 NA non-coding downstream 7210 38285579 ~ 38287528 (+)
G82285 NA non-coding downstream 145111 38423480 ~ 38425049 (+)
G82338 NA non-coding downstream 196481 38474850 ~ 38475108 (+)
G82339 NA non-coding downstream 198850 38477219 ~ 38483324 (+)
G82353 NA non-coding downstream 280097 38558466 ~ 38564283 (+)
AMCG00010648 NA other upstream 25307 38247021 ~ 38252010 (+)
G82236 NA other upstream 107786 38169156 ~ 38169531 (+)
G82192 NA other upstream 389154 37886220 ~ 37888163 (+)
G81987 NA other upstream 1013268 37261324 ~ 37264049 (+)
G81971 NA other upstream 1026148 37230428 ~ 37251169 (+)
AMCG00010655 NA other downstream 69909 38348278 ~ 38353962 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other downstream 89300 38367669 ~ 38372651 (+)
AMCG00010681 trim23,LOC107558665,LOC106562204,LOC106568315 other downstream 358107 38636476 ~ 38640125 (+)
AMCG00010687 srek1,LOC107684347,LOC107730337,LOC107681054 other downstream 503710 38782079 ~ 38797886 (+)
AMCG00010695 NA other downstream 964488 39242857 ~ 39248625 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
grasscarp (Ctenopharyngodon idella) CI01000304_00877256_00878179 PURG coding CI01000304 null 876134 ~ 878179 (-)