AMCG00010652


Basic Information

Item Value
gene id AMCG00010652
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 38306254 ~ 38317804 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010652
ATGGAGGGCAGTGGTGGCTGTAACTCAACCGGACCCCCAACTCAGGCATCCCTCGACTCTCGACGGGGGGCCGCCCACTCTGCACTGGGCAAATTCACCATCCCCAGAAAGAAGAGGGGCCCGGAGAACGCTCTTCTGGAGGACTGTCTCAAGGAGAGTCGGGAGCACGGCGGCCTTGTGTCGGCGCTGAACGAGTGCCGGCTGGACGTGACGGGTGATTTCTTCCTGTCCTGGGAGTGTCTTGACGTGAAGCTTGTGAACAACGTGGAGTTGGCGAGGGAGTTCTCAGAGAAGAGGTCGGAGATGCGCTCCAAGGGCCGACATGGGCGAGAGCTGGAGGACCGGTTCTGCTTCTTAGTCACGTCGCACACCAGCGCCCTGGAGCTGTGCAGGAATGGTGTGGAGACGGACACGAGCACCCCACACGTCCTGGGCAACCCGGCGTGCGGCGTGCACCTATACCGGCACACGGACGTGGCTCTGAAGTGCGTCACCGGCAAGGCAGCCTCCCCCAGGACAGTCGTCGTTTTTAAGGTGATCCTGGGTAAGGTGAAGAAGGTGCCGTCCTGCGTGGGGAGGAAGGCAGTCCACGACCCCACCGTGCACTTCGACTGTTTCATGTGCAGAGACCCCAGCAGCCCCAGGGACAGCCTCTCCCTGCAGGCCGTGGGCTCTTCGgtgtttgtttttgactATAATGAACGCCAGGAGCTGACCTGCAGGCCCAGGCAGTGTCTGCCGTGGGCTGTGGTCTCACTTCTGCCCTGCAGCAGTAACTCGATGACGTCTGCCATCAGCTGTTCCCCCGTGAAGCTGCCATCACCAGGAGTGGCACACGGTGCTGTAGAAGCCCTGAAAGGCTGCACCATCGCTGAGAGGAGGGGCAAAGGGGAGAACGCCACTGTCATATTTAAACACTTTGGCAGCGCAGAGAATTCGCTGCCTTCGCCGGACTACTCATCTCCAGGCAGCTCGGCAAGTTCCCCCTTCTCCACAGCGCTCCCTGGGGCCGGTCTGATGAGCGGGCAGTTGTACGGTGGCTACGAGAGCGAAGGAGGAACCTGCTCTGCCTACAACGCTGAACAGCTGTGGGCAGCTTCGTACTACCCTGCCGGATTCATGCCCCCTTTCATCACCGAGGCCCAGCGGGAGATGAACTGGGTGCCAGTGGCattcaaccctggtcctgcgGCTCTCCCAGAAGGCAGCGCTCACCTGGGAGGGCCTGTGAATATACTGGCTCCTTCCAGCGGGGACTTCGCATTCGGCCCATCACCCAGTGCGCACTATCTTGCAGCGAGCCCGAGCAGCCAAGGTTATTGCGATTCCTACGTCTACGTCTACCCGAATCACCAACACCAGCAGGCAATCCAGACGCCTGCAGCAGCGCCCGTCAGTCAGATCTCCACCACTGTGATCACTTCTCGGGTCGTCAAGGACCCACGTCTATACGGGAGGGAACAGGAGGGCTTGAAAAGAAACACAGGCGCGGAGGCCAGACTGGGAACCCAGCAGAACAAGCTGCACAAGTCTAAAGTGGAGCAAGAAACTTACCGAAAACATCCGCCAAGGAGGGAAGCCCAGGCGAGGGGCCGGGGCAGTGCACGCGGGGTGGCAGAGATTGACAGAAGGGGACAGGCATGCCACGGAGGTTCACCTCTCCGACCTGCTTCCTCAGAACACCAAGAACAGAAGCCCCCCGTGgaggttttgaaaaataagtttaaaaaatatgccAAGTATCTGGTGAtgacagagaaggagaggatTGCCTCTATCAACTCTCTGAAGGACATGCCTCTAGCGGAAAAAGAACTTCTGCTCCGCAGGGTTAAGTTCTACgacatgtttttcaaaaaagACGTAAACTGTCAGCGGGTCACAGGTGAAAGTGCTCCGAGTGCGGCAGAGCAAAGCAGGAGCTCTGGGCTCAATCTTAACGCTGATCTATACCCCCAGGAGGCACCTAAAATCATTCCCAAGAGCAGACGGACAGACTTACGACTGCAAACTACATCCGGACATTTCCTTCCCGGCACGCTGGAAATCCCCTCTGAACTCTCTTCTGGGATTACGCACGATGTGAAACCGGCTCAAGATGGCATCTCTGTGTCCAGGTCGAGCAGAGGCGACCCTTCAGGGAATCGTGCCACCGAGTCATGTGCGTCTGCCGCAGCCAAGCCAAACGTGGTTTTCCCACAACACCCTGCAGAGCAGCCAGAGAAAGCTACGGACACCGTGTCTCCAAAGCCGGAGATCGTGGGAGATTTACCGTGTTTAGGAACATCTGACATCTCCGCTGATCAGGATCAACCTAACAACTGTGAGCAGCACAGACAGGAACCCTCCACCTACGAGTCGCCCTACGAGGAGATGCCAGGGCTAATGGACATCTCCGTAAACACTGACGACTTCCAGTGTGAGCATCGGCAGGGGGCGGCCAGAGAGACGGCGGGCGGCGAAACGGAAGAAGAAAGCATAGACCCTCGGTACGTAGACGAATTCGTGTGCATCGCACAGTGTGAAGAAGTGTACAGTGCTGGTGTCCTGGAGAGCAAGGAGGCCATGGACACTGATCCCTTCACTGCCTTGAAGCAACACTTGCAGACAGTGCAGTTTGAATGGGACGCCGGGGACCACCGCAGCACAGCCCCCCACGGACAAGGTTTGGATGACACCTGCACCCCGCGTGAAAATGGAACAGGAGCTGAAGAAAGTTCCCCATGTCATTCCAAGCGTGAGGAGGCCGTGTGCAAAGGCTGCGAGGATCTCTGCACTGAGGACCACTCGGGTTCCTCAGACACCATTTACTGGTTCCTACACAGACGGATCCAGTTCGCTCAGATGCTGCTCACATCCAGACAAGCTGATCTGAAACATGTCAATGCAAGCTCCGGCAGGGGGGACAAACCCAGCTTCCAGATCACAATCAAAGCTGATTCCAGGATTTCCGGCACAACTAGACCACAGTGTTGTCTGGTGTTTTCTTCTGCGGAGTCGTCGTGCGACAGAACCAAGCTTCTAATGAAGAACCCAGGCCTGGTCTCAACAGCACCGCTAGACCACGACTCAACGGCTGGCAGCCGAGGAACGGTTTCCTTCCGGGCAGAACAAGACGGCTTCCCCCTCACACGTGCAAATGGACATGTTCCCCAGGATACATCTCTGCGTAATTACGAAGAACACAAAGCTGTGGATCAAAATGAGTCAGAAGGACAGAGGGCCCTGCACACTGACACCGACCTGATCCACTGCTCGGGCGCACACGGGAAGGTCGGCAAAAGTCCAAGAAAGACTTCCAGCCCCTTGAAGAAAGAGCTTGGAGGAGCTGCCAGGAGTAAAGTTACACTGAATCAAAGAAAGAAACCGATGAAACGGTTTGTGAAAGTTTCGGGCCGCCCTAACACAACCTGCAAGATGGGTATGAAGTCCACGGCACTATTTTCAAAAGCAGACATGAAACGGATCCGGATTTCCAGGCAGGATACTATCGGGGCCTTATGGAAACTGGGGAAGCCCCCCCACCTGAGGGGCTGTGTCTGTTTGAAAGGGACCCTTATTTCCCAAACTGCTATAACCAAAAGAAAGAAGCAGATGGCCAAAAAGAAACCAAATGCAGAGAAGAGCCGTATGGAAAACAACTGCATTTCAAGTGATAAAGGGTCCGAAATATTTCCCGTCTCCCAGATATCTGTGAATGAAATGGAGGAAACACCAGGGCTGTGGCAGGCATACGTGCCACAGATCTCACTAGGCCGCGACCGCTCTGCGAGCAGGAAAAGAGCGAGGAACTCCGCAGTGGGTTTTCCCTCCAGCGAGGAGGCGGACAGCTCAAGTGATGGACCGTCTTTAAAACGTCCCGGTCCTTCTGATGGCGACGCTGATGCCGAAGAGAACGATTGTGACAGCGAGCCTCTCGTCGCAGAGCGTGTTGGAGAGACGGACATCGGTCGTGTTTCTGACTCGCCCTTCTCTGCTCCTGCTGCAGGCGTGGATTTTAGGGATGCAGCCCAGGTGGCAGACTTAGCACAGGCGCGGGCGTACGGAAACAAGGAAGCCTCAGAGGCCACGACTGCTGCACGTGACTCAGTATCGCGATCTAAAAATAGCCCTGGCGCAGCAGCAGACAAACACAGCAGATTTGCTTGTACATTTCCTGTAGTGCTTAACAACGGACCTGCAGCTCCCAGTCACGTGCAAGACaacgagggagagagagaggctgataTCAGGGTGAATCATTTAGAAGCCAGCGTAACACCTGGGGAAAATAAGCTACATAGAAGTCAGCTGGGACATGCAGACAGCCTATGCAGATCTGGACCAGAGGTGAAGATGGCTTGTGATTCTAGTGAGGAGGTCAGACTGAAGTATGAACATGTGGACACTGTGATCCCTGTACCACTGGAAGTCGAAGAGAAGTCTGCCGATTCTGAAGGGAAGGTGGGAACTAATAATACGTCTTCCTGCAATGTAATGACTGCAGGAAACGGCAAAGAAAACCAAACTGCTCAAGGCCTGAGAGCGAGAGGATCTAACTCCGAGCTGACAGTTGACTTGACAAAGACCGCAGCAGTCTCACACGGCCAACGGACATCCAGTGAAATATCGGACAGCAGAGACAAAGAGCAGCGTCCACTGGGGGAGGCCGGACCACCATCAGGGACTTACTCTTCACCTCGGGCTTGTAGTCACTCTTCCAGTTTGAAAGGAATATGTAGTGGCCACTTGACTTCTTCAGAAGGAGCCAAAAGAGAGGATGTCATCACAGGCCATCTGCAGACAACATGCAAGACATTATACCAAAGAGACAACCAGTCTGCAATTCGTCAAGCGGAGAAGTTTGACCTTTCAAACTGGGAGAGCTGGGAGAGAAGCCCCATTAAGGATCTGGAAGATTTTGTCATGGCAAGGTCCAGTGTAATACAAGTCAACGAGCATTATAAGCTTCAGGCACATGGGAATCTTGAGCCGAAGGTCAATGCTGAAATAAGAGCACCAGCAACAGGACCGTCCAGCACCAAAAGTCAGACGGACCATCAAAGCCTCGGCTTATGGCCAGCAGGCAGCAGCCGCGGTCAGCACCCTGTTGCCGGTGAGAGTAAAGATGCATTTGCACGAAGCCCCCGAGCTCACAGACCAAGCAGGAACATTACGCAGGGCAGTAACACACATTACCAAATAGACTCGTTTTACACTACGGCACGTCTGAGGGACCACAGCGTGACGGACATAGACAGGACTCTAAAAGAGGTCGATGGGGCAACATCCCTGCAACACCTGCACCTGCTCAGATCCAAGTGCCGGCGAATGCTTCCCTCGTTCATCTCTACGTTCGAGGGGTGCCAGTGCGTGGACTTCAAAGACGCCTTTGTCTCTAGAGACCTGGTCATCGAGAGGGACCTCGGAGGGGGAGCCTCAGCTGCGCCCGTGGTGCTGAAATACAGGGCGCTGGACTCATTTCTGGAGCTGCAGATGATGATGGAAGCGGTGCAGTTCGTGGAGAACAAAATCAGTTTCCTGAGCGGAGACCCGACTTTCAGGAGTCTGCTCTGGTCTGACCCAACGCTGCGCAGAGAGCTTCTGGAAGGCAAGGAGGGCGACCGACAGCAGCCGTCACTGTTTCCCGCTTTCCAGGAGAGACTGGCCCAACGTGGCGACAATAAACGGAGGAAACGTCACTCTCGGCCCTCCTCGCCGACGTTCTCACAAGCAAAGGAGACCTCTTACTATTTGTATCTCAAAAACGAAAGGGAGAAAGCTGAGAGCCAAGCGGTGCTGGAACAGTGTCTAAACCGTGAAGCCTTCTCTCTGTCCACGCCTCTGTCAAGTTGCATCAATTTCGGAGACTGCATAGAAGACTTGGAACTCCTGCAGAAAAACATTGTCTCTTTCATGGAAGCCCAACCCAGCCAGCCACGAGGGGGAAGGGACTTTGGCAAGGTGGAGCAGCTTGGCGTTGTACGCAGACTCCTTCAGGAAAAGATCAGCTACCTGAGGAGCAACAAAGAGGTCGATGCCAGAATCTCCTGGTTTGGCCTGGAGCACATCCTGTTGGACGCCGCAAAGACAATGGCGTGGGAGGACCTCCGGGAGCACAGGGGCAGTGGCCCGTCAGACCCCGGGAAAGACGAGACGCGGCATGTGATCAACGAAGCGGCCACGCGTCGACTGCACAGACTCTACGAGAAGATCCTGCCCGGCTGTGAATCGGAGACCCCACCCTGCAGCCGAGCGCCACCAAGGGACCCCCATCTGGTCACCGACATGCAGaacaaagAAGCGAGCATGGAAGGACCCATAGAAAAGGACAGCTTGTCTAACAAAGAAAGGAATGAAGACCAGATAAGAACAAATAAGCTGCCTGAGATTCACCAGTCGGCCGCCACCAAGAACAGCACTGCCCTGCCCTGTCCGGTGGAGAGGCCGGAGAGCCAGCAGGTCCGGTCGCACCTCGAGGCCCCCGATTTGCCGGACAGACGGCTTTCCTTCCAGCAAAACATTCAGATTCAAGCTCTCGGTCTGCGGTCGCTGATGGCGATGCACAGTTCCCATTTCGATGCGGAGAAAGAGGTGACGGAGACCCCCGCAGCAGCCAGGCCAGTCCGATCCAGTCCTGCCGTGGCGCGCTGCCCTCCGCCGAAAAGGCAAAGTAGGAAACCGAACTCGAGGAAAATCAGGACACCCGCCAGCAACTCTGTACCCGTGCCAAGCGACGTGGCTCTGGGGCCGCAGCACAAGCTGTGGAGGCCCCTACCCAGCAGTCAGAGCTTCACCCTGCTGCCGTCCGTCCTGGCTGTAGGAAGGCAAGGAGGGCAGGGGCAGCAGCCACTGCAGAAACCACAACCACAGCCACTGGCAGCCGTCTGGGGCTCCACGGAGGCGCGGCAGAGTAGACCACCCTGGACTCACCCTGACACCCAGCTGGGCAGTCCAGGGATACCAGGCCCCGGCGTGCCAGCGGCCCCATGGAACGGCCAGTTACAGATCCTGTCAGCGCCGGCTCAGGGCTACTGGAACCACGCCGTCCTGCCTTACTGGTCCCAGTACCAGGGAAGCACCGCTTGGACCCAACAGCTTCCTGGCGCCGTCTTTTCCACTGGCAGGCCGGAGCCCCAGGCAGAAGCCACTTCCTACCCAGCCTTTCCAAGCACTACAAGCTCCTGTTTCTACCACCCCCAGGCACTGAACTGCTCCTGCCCCTATTACACAGTGGACTCTTATTACCTGTGCAACGAGTACACGTACGCCATGGACAACTCCCCGCTGCCCGCAGTGGGGAACCGGCCTCTGAGCAGGTTTTACTCAGATGCAAGTTACTCGGGGACGGGCCTCACGCCAGCAGGCAAGCCCCTTAAAAGACGTTTACTGTGATATTTAACAGCACCGACACTCATGGGACTCCAGGGGTCTGTGCTGTTGCCTCGTTTTTGTCTTCCctagtttctgttttgttttgttttttatccacCAGAAAGAATGCGTTAGTTAACTGTTGATGATGTCATTATTGGTAGTACTCCCAGTAGTAGGTAAAAGGACACAATCTGTATTAACAGACCTGTCCAGTGTGCATTGATACCTGTCTGAATACCCCAGTGACTGATCGAAGGAGTGTTACGTTATAGTGAGCTGTCAGGTGTCTGTTACACTAACCGTGTTTTTTACATGCGTGTTTTACAGTGTTCTGGTAGTCTCCACACATTCACAGGGAGTTGTGGGATCATGTCACCTGACAGGAAACCTGATTTTGTTCTGGGCTGTTTATTAGATGATGCTTTGCAACTGAAAACATTAgttaataaagacatttacatttaacttAGTTACAGGTAtgcaggtatgtgtgtgtgtgtgcgtgtgcatgtgcgtgtg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010652 True 7875 mRNA 0.55 8 38306254 38317804

Neighbor

gene id symbol gene type direction distance location
AMCG00010650 NA coding upstream 27885 38277317 ~ 38278369 (+)
AMCG00010643 NA coding upstream 255307 38043745 ~ 38050947 (+)
AMCG00010644 LOC108427269,LOC105894604 coding upstream 280925 38010059 ~ 38025329 (+)
AMCG00010641 LOC106571427 coding upstream 334574 37960752 ~ 37971680 (+)
AMCG00010636 NA coding upstream 432769 37865062 ~ 37873485 (+)
AMCG00010653 ppp2cb,LOC107758729,LOC105021738 coding downstream 7881 38325685 ~ 38339014 (+)
AMCG00010654 enoph1 coding downstream 57655 38375459 ~ 38378170 (+)
AMCG00010660 cops4,csn4,LOC106562268,LOC107685106 coding downstream 129499 38447303 ~ 38458936 (+)
AMCG00010661 NA coding downstream 150568 38468372 ~ 38474161 (+)
AMCG00010670 NA coding downstream 166317 38484121 ~ 38487527 (+)
G82250 NA non-coding upstream 18726 38285579 ~ 38287528 (+)
G82234 NA non-coding upstream 149656 38156397 ~ 38156598 (+)
G82231 NA non-coding upstream 195699 38110249 ~ 38110555 (+)
G82230 NA non-coding upstream 208968 38097026 ~ 38097286 (+)
G82229 NA non-coding upstream 210352 38095621 ~ 38095902 (+)
G82285 NA non-coding downstream 105676 38423480 ~ 38425049 (+)
G82338 NA non-coding downstream 157046 38474850 ~ 38475108 (+)
G82339 NA non-coding downstream 159415 38477219 ~ 38483324 (+)
G82353 NA non-coding downstream 240662 38558466 ~ 38564283 (+)
G82468 NA non-coding downstream 709280 39027084 ~ 39027418 (+)
AMCG00010648 NA other upstream 54244 38247021 ~ 38252010 (+)
G82236 NA other upstream 136723 38169156 ~ 38169531 (+)
G82192 NA other upstream 418091 37886220 ~ 37888163 (+)
G81987 NA other upstream 1042205 37261324 ~ 37264049 (+)
G81971 NA other upstream 1055085 37230428 ~ 37251169 (+)
AMCG00010655 NA other downstream 30474 38348278 ~ 38353962 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other downstream 49865 38367669 ~ 38372651 (+)
AMCG00010681 trim23,LOC107558665,LOC106562204,LOC106568315 other downstream 318672 38636476 ~ 38640125 (+)
AMCG00010687 srek1,LOC107684347,LOC107730337,LOC107681054 other downstream 464275 38782079 ~ 38797886 (+)
AMCG00010695 NA other downstream 925053 39242857 ~ 39248625 (+)

Expression


Co-expression Network