Gene
RNA
| Item | Value |
|---|---|
| gene id | AMCG00010669 |
| gene name | NA |
| gene type | coding |
| species | bowfin (Amia calva) |
| category of species | ecological fish |
| Item | Value |
|---|---|
| chromosome id | CM030129.1 |
| NCBI id | CM030129.1 |
| chromosome length | 41163702 |
| location | 38515937 ~ 38534810 (+) |
| genome version | AmiCal1_2021_bowfin_Genome |
| id | name | namespace |
|---|---|---|
| GO:0000413 | protein peptidyl-prolyl isomerization | biological_process |
| GO:0006457 | protein folding | biological_process |
| GO:0003755 | peptidyl-prolyl cis-trans isomerase activity | molecular_function |
| RNA id | representative | length | rna type | GC content | exon number | start site | end site |
|---|---|---|---|---|---|---|---|
| AMCG00010669 | True | 1176 | mRNA | 0.51 | 5 | 38515937 | 38534810 |
| gene id | symbol | gene type | direction | distance | location |
|---|---|---|---|---|---|
| AMCG00010671 | NA | coding | upstream | 27651 | 38487689 ~ 38488286 (+) |
| AMCG00010670 | NA | coding | upstream | 28410 | 38484121 ~ 38487527 (+) |
| AMCG00010661 | NA | coding | upstream | 41776 | 38468372 ~ 38474161 (+) |
| AMCG00010660 | cops4,csn4,LOC106562268,LOC107685106 | coding | upstream | 57001 | 38447303 ~ 38458936 (+) |
| AMCG00010654 | enoph1 | coding | upstream | 137767 | 38375459 ~ 38378170 (+) |
| AMCG00010672 | ppwd1 | coding | downstream | 96994 | 38631804 ~ 38633945 (+) |
| AMCG00010673 | trappc13,LOC107667267 | coding | downstream | 118075 | 38652885 ~ 38661453 (+) |
| AMCG00010684 | NA | coding | downstream | 137387 | 38672197 ~ 38673526 (+) |
| AMCG00010675 | NA | coding | downstream | 137414 | 38672224 ~ 38675740 (+) |
| AMCG00010674 | NA | coding | downstream | 144998 | 38679808 ~ 38684359 (+) |
| G82339 | NA | non-coding | upstream | 32613 | 38477219 ~ 38483324 (+) |
| G82338 | NA | non-coding | upstream | 40829 | 38474850 ~ 38475108 (+) |
| G82285 | NA | non-coding | upstream | 90888 | 38423480 ~ 38425049 (+) |
| G82250 | NA | non-coding | upstream | 228409 | 38285579 ~ 38287528 (+) |
| G82234 | NA | non-coding | upstream | 359339 | 38156397 ~ 38156598 (+) |
| G82353 | NA | non-coding | downstream | 23656 | 38558466 ~ 38564283 (+) |
| G82468 | NA | non-coding | downstream | 492274 | 39027084 ~ 39027418 (+) |
| G82488 | NA | non-coding | downstream | 568110 | 39102920 ~ 39103266 (+) |
| G82495 | NA | non-coding | downstream | 616997 | 39151807 ~ 39152153 (+) |
| G82520 | NA | non-coding | downstream | 682017 | 39216827 ~ 39217078 (+) |
| AMCG00010656 | hnrnpdl,hnrpdl,LOC106562358,LOC107653490 | other | upstream | 143286 | 38367669 ~ 38372651 (+) |
| AMCG00010655 | NA | other | upstream | 161975 | 38348278 ~ 38353962 (+) |
| AMCG00010648 | NA | other | upstream | 263927 | 38247021 ~ 38252010 (+) |
| G82236 | NA | other | upstream | 346406 | 38169156 ~ 38169531 (+) |
| G82192 | NA | other | upstream | 627774 | 37886220 ~ 37888163 (+) |
| AMCG00010681 | trim23,LOC107558665,LOC106562204,LOC106568315 | other | downstream | 101666 | 38636476 ~ 38640125 (+) |
| AMCG00010687 | srek1,LOC107684347,LOC107730337,LOC107681054 | other | downstream | 247269 | 38782079 ~ 38797886 (+) |
| AMCG00010695 | NA | other | downstream | 708047 | 39242857 ~ 39248625 (+) |
| G82671 | NA | other | downstream | 1314136 | 39848946 ~ 39849369 (+) |
| G82723 | NA | other | downstream | 1512276 | 40047086 ~ 40049815 (+) |
