AMCG00010674


Basic Information

Item Value
gene id AMCG00010674
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 38679808 ~ 38684359 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010674
atgtatttatttcgtGAGACAGACTTCGCCGAGTTCAGCGGGACACTGGTGGAGACTGACTTCGTGGAGGTGCCGTCCCAGATGCTGGAGAACTGGGTGTGGCAGAAGGAACCCCTGAAGAGGATGTCAAGGCACTATAAAGATGGGAGCCCCATTCCTGAAGACCTGCTGGAGAAACTCATCGCCTCCCGGGTGGCCAACACGGgCCTCCTGAACCTCCGGCAGATCGTCCTGAGCCGAGTGGACCAGGCGCTGCACACCAAACCCAGCGCCGACTCGGCCCAGGAGTTCGCCAAACACTGCCAGCAGATCCTCGGAGTTCCTGCCACCCCAGCTGAATGCCTCTGTTTCGCCGCAGGGACCAATATGACGGCCGGTTTCGGTCACTTGGCCGGGGGCTACGATGGCCAATACTACGGATACCTGTGGAGCGAAGTGTTCTCCTTGGACATCTTCTTCAGCCgctttgagagagagggaatcaTGAACCCTGAGGTTGGCTTGGAGTACAGGAGGGTCATACTGGAGGCTGGGGGCTCAGCTGATGGGATGGACATGCTGAGAAAATTCCTGGGCCGGGAGCCGAGCCAGTTGGCCTTCTTCCAGTGCAAGGGTCTGGCCTGCCAGGCGGAGGAGGCGGCCGCACAGTCACATCCCCCTCGAGAGGAGCCACAGGAAGGGCAGCCGAAGTGA

Function

GO:

id name namespace
GO:0042692 muscle cell differentiation biological_process
GO:0051146 striated muscle cell differentiation biological_process
GO:0010927 cellular component assembly involved in morphogenesis biological_process
GO:0055001 muscle cell development biological_process
GO:0055002 striated muscle cell development biological_process
GO:0055004 atrial cardiac myofibril assembly biological_process
GO:0055014 atrial cardiac muscle cell development biological_process
GO:0031032 actomyosin structure organization biological_process
GO:0097435 supramolecular fiber organization biological_process
GO:0030239 myofibril assembly biological_process
GO:0070925 organelle assembly biological_process
GO:0061061 muscle structure development biological_process
GO:0060537 muscle tissue development biological_process
GO:0014706 striated muscle tissue development biological_process

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010674 True 693 mRNA 0.60 5 38679808 38684359

Neighbor

gene id symbol gene type direction distance location
AMCG00010675 NA coding upstream 4068 38672224 ~ 38675740 (+)
AMCG00010684 NA coding upstream 6282 38672197 ~ 38673526 (+)
AMCG00010673 trappc13,LOC107667267 coding upstream 18355 38652885 ~ 38661453 (+)
AMCG00010672 ppwd1 coding upstream 45863 38631804 ~ 38633945 (+)
AMCG00010669 NA coding upstream 144998 38515937 ~ 38534810 (+)
AMCG00010685 NA coding downstream 54090 38738449 ~ 38777045 (+)
AMCG00010686 NA coding downstream 183439 38867798 ~ 38880138 (+)
AMCG00010689 NA coding downstream 249984 38934343 ~ 38962861 (+)
AMCG00010690 NA coding downstream 294321 38978680 ~ 38983811 (+)
AMCG00010692 LOC104930938,LOC103371488,LOC107738919 coding downstream 391306 39075665 ~ 39087253 (+)
G82353 NA non-coding upstream 115525 38558466 ~ 38564283 (+)
G82339 NA non-coding upstream 196484 38477219 ~ 38483324 (+)
G82338 NA non-coding upstream 204700 38474850 ~ 38475108 (+)
G82285 NA non-coding upstream 254759 38423480 ~ 38425049 (+)
G82250 NA non-coding upstream 392280 38285579 ~ 38287528 (+)
G82468 NA non-coding downstream 342725 39027084 ~ 39027418 (+)
G82488 NA non-coding downstream 418561 39102920 ~ 39103266 (+)
G82495 NA non-coding downstream 467448 39151807 ~ 39152153 (+)
G82520 NA non-coding downstream 532468 39216827 ~ 39217078 (+)
G82521 NA non-coding downstream 535560 39219919 ~ 39220207 (+)
AMCG00010681 trim23,LOC107558665,LOC106562204,LOC106568315 other upstream 39683 38636476 ~ 38640125 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other upstream 307157 38367669 ~ 38372651 (+)
AMCG00010655 NA other upstream 325846 38348278 ~ 38353962 (+)
AMCG00010648 NA other upstream 427798 38247021 ~ 38252010 (+)
G82236 NA other upstream 510277 38169156 ~ 38169531 (+)
AMCG00010687 srek1,LOC107684347,LOC107730337,LOC107681054 other downstream 97720 38782079 ~ 38797886 (+)
AMCG00010695 NA other downstream 558498 39242857 ~ 39248625 (+)
G82671 NA other downstream 1164587 39848946 ~ 39849369 (+)
G82723 NA other downstream 1362727 40047086 ~ 40049815 (+)
AMCG00010735 clg14h18orf25 other downstream 1868008 40552367 ~ 40566357 (+)

Expression


Co-expression Network