AMCG00010684


Basic Information

Item Value
gene id AMCG00010684
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 38672197 ~ 38673526 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010684
GTCTACAGAGCCAAACCCAGCCTGAGGATGACGTTGCAGGCCGCCGTCCCGCAGGGCTCCACTCGGCGCTGTCACCTGTCCGCCGGCAGCAGGAACCGCCTGCGATGGGACCTGTCCCCGGACGACATCCGGCGCCGGACGGAGGAGCTGATCCAGAGAGTTAAACGGGTGTACGACAGCGTGGGAGCGCTGGACATGGACCGGGTCTCATATGAAAACACCCTGAGAGCTTTGGCAGATGCAAAAGTCACATATACAGTGGAGAGGCACGTGCTGGATTTCCCGCAGTATGTCTCAGCCTGCCGGGAGCTGCGGGCGGCAAGCACCGAGGCGGACAAGAGGCTGTCAGACTTCGACAGACATCGCCGGGGGACAGAGCACAAGGTGTCGGGTCACGTCACTCCCTCCTGGCTATCGCTCCTGCACAGGGACCGAAATAAACCACTTGAGAGCAGAGAGGGCAGACGGGACATTCTGTACACTTATCAATCAGGCTTTCGTGTCTTGTGA

Function

GO:

id name namespace
GO:0061061 muscle structure development biological_process

KEGG:

id description
ko00020 Citrate cycle (TCA cycle)
ko00190 Oxidative phosphorylation
ko04714 Thermogenesis
ko05010 Alzheimer disease
ko05012 Parkinson disease
ko05016 Huntington disease
ko04932 Non-alcoholic fatty liver disease

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010684 True 510 mRNA 0.60 3 38672197 38673526

Neighbor

gene id symbol gene type direction distance location
AMCG00010673 trappc13,LOC107667267 coding upstream 10744 38652885 ~ 38661453 (+)
AMCG00010672 ppwd1 coding upstream 38252 38631804 ~ 38633945 (+)
AMCG00010669 NA coding upstream 137387 38515937 ~ 38534810 (+)
AMCG00010671 NA coding upstream 183911 38487689 ~ 38488286 (+)
AMCG00010670 NA coding upstream 184670 38484121 ~ 38487527 (+)
AMCG00010674 NA coding downstream 6282 38679808 ~ 38684359 (+)
AMCG00010685 NA coding downstream 64923 38738449 ~ 38777045 (+)
AMCG00010686 NA coding downstream 194272 38867798 ~ 38880138 (+)
AMCG00010689 NA coding downstream 260817 38934343 ~ 38962861 (+)
AMCG00010690 NA coding downstream 305154 38978680 ~ 38983811 (+)
G82353 NA non-coding upstream 107914 38558466 ~ 38564283 (+)
G82339 NA non-coding upstream 188873 38477219 ~ 38483324 (+)
G82338 NA non-coding upstream 197089 38474850 ~ 38475108 (+)
G82285 NA non-coding upstream 247148 38423480 ~ 38425049 (+)
G82250 NA non-coding upstream 384669 38285579 ~ 38287528 (+)
G82468 NA non-coding downstream 353558 39027084 ~ 39027418 (+)
G82488 NA non-coding downstream 429394 39102920 ~ 39103266 (+)
G82495 NA non-coding downstream 478281 39151807 ~ 39152153 (+)
G82520 NA non-coding downstream 543301 39216827 ~ 39217078 (+)
G82521 NA non-coding downstream 546393 39219919 ~ 39220207 (+)
AMCG00010681 trim23,LOC107558665,LOC106562204,LOC106568315 other upstream 32072 38636476 ~ 38640125 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other upstream 299546 38367669 ~ 38372651 (+)
AMCG00010655 NA other upstream 318235 38348278 ~ 38353962 (+)
AMCG00010648 NA other upstream 420187 38247021 ~ 38252010 (+)
G82236 NA other upstream 502666 38169156 ~ 38169531 (+)
AMCG00010687 srek1,LOC107684347,LOC107730337,LOC107681054 other downstream 108553 38782079 ~ 38797886 (+)
AMCG00010695 NA other downstream 569331 39242857 ~ 39248625 (+)
G82671 NA other downstream 1175420 39848946 ~ 39849369 (+)
G82723 NA other downstream 1373560 40047086 ~ 40049815 (+)
AMCG00010735 clg14h18orf25 other downstream 1878841 40552367 ~ 40566357 (+)

Expression


Co-expression Network