AMCG00010690


Basic Information

Item Value
gene id AMCG00010690
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 38978680 ~ 38983811 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010690
CCTCCTTCAAAGCTGAGGGAAGAAGAGCAGATGGTTTCAGTGCCTCTGtgcggcccggcccggcccggcccgcaGTCCTGGGCAGAGATCCAACAATGCGCTCCAGCGAGCCGCTGCGCCAGAGACCTCGTTCTCCTGAGCATAATTACTTTCTCATGCACTGTGTGGAAATGCATTACCCGGGgacAGGCCTTTGTAACTGGATTGCATTTAAATCGGGGCGAACTGAATCTCTGGAGATGTCGGCCACCACCCACTGGAAAAAGACTTTGTGATCAAACTGGTGTGAACGGGGATTCGTGAGTGACGGGTCTGGCAAGAGGAGGACCTCTAATGTGGACGGGATGTGAGCTGAGGTGATCAATTAACAATCCCAAAGAGttataacagcaacaacaacagcataaTAATGGAAAGAACACTGAATTCTGAAAAGGTTCTGTACAGAGTGTTGAAGCCCAGTCTGATCTCTAGTTATTCCTCATGGTTCGCAATAGGTTGAACTTCATCTGGGTTAAGAGGTGAACTGCAGCTCCACAGGACTTCGTACATCAACTCCACAGCTTCTACCCTCCCCCCCCCAGCTTCAATTTGTCTCCATAGCTAACAACGGTAGCCCAGGAACAAACTGCTGGAAGAAAactgtgcaataaaataaaatgtgtgcctCTCTAATCATCACATtcgaaacataaataaataaatcccgtACTCTGTACCGACCCAGTGTGGCAGGAGTGGGGAGAGCAAGTCCTCCGGGGCCGGGCTCCTCCAGGGTTTATAGGTTCCGTTCAATTAGCAACTGATTAAGATcgtgaataaataataatgaatccaattaagtaattaagacccactggaatgaaaaccagaaataCCTTTGTCCCTAGAGGACTGGAGTGGCCTCCCCCTGCAATACAGCACTGTTGTGCTGAGAGGCCCTGGTATGAATagtataaaataagcaaaatatttcaacatTAGCCCGACAGCACTGGCTGACAAATATCCTTTTGtaaagatacaaatattttacaacaaaaaaagatgcaCACTATGTATATGTTGTCTCCTCACAAATGATCGACAAATGATCTTTTCTCCCCTGATGAGGAGAAATGAGACAAATCAAACGTAATCTTGGTGACCTTCAGTGTTGTCAGAATGTAGTGCATTGAAACACATGCTCTCACGCTGTATGTAGTGAATTGAAACACCAGTTCTGACATGCGGTTTTCATGCTCTGGGGCAAAACATACAACTGCAAACTGTGGATACAGTTCATACAGACCTAGTGAAGCTCTCTTGAAATCTGAACAGGATATTCACAAGCCACTCTGTAAACATACCTCCCTGGGACGTCCAAGCATACTCAGAATTATCAAACTAAACATGTGGCTTTTCTACCGAGGTCGCTGAACTCTGCGAAGTTACATAACACTGGGTACGATCATTTCAAAGAGCGTGCTGTATCAAAGCAGGTTCATCAGAGAAGGGgagtaaaataacacacaaaagcGACAGCTGCTAAATGTACACAAAGACTTCTTGATTGAGTGTACAGTGTGACGTTATATAACCTCAACCGAGAGTCTCAACTAGTGGAAGCACCTGGACACGTGACGTATCGGACTGAGGACAAAAGTGTGAATTCACATGAAAGTAATCATCTCAAAGGTAAACGTAAgaggttttgtttctgcttaGATTTTTCTGCAAACGTTTCTTAAAATATCCCCAatttttgtaatgcaaatgGGACCGGAGGCTTTCTATCACAAATTGACAGCCGTGCTTCACCCCTTAACGTTTGCCAAATCTACAGTAATGACCTCAGAGTACATCGAtgctgtttgtcttttaaagcTCCACATGTGTGAAATTCTGCTCCTCTGAGGGTTTGAGATTGTGTGTCTGGAACttcaaaaagacaacaacaaaccAACAGCACTTCAGAGATGATCTATTTATTTCCAGTTTGGTTCTGTTACTGGTGCAGTACTTAATATGTAATCCCTTTCCGACTCTCACAACTCGGGTGCGATTGATGTGATGTCACCGCAGTTCATCACTAAACCCAGATGGCCTGGACTTTTGCAGGAGCTTTACTGTGCAGATGATTGACAGCGCAGGTCTTTCTAATGCCTGAGCCAGAAGGAAGACTTACTTGCCGGATACACAAAGCTCTGGGATTGGATGGCAGCTCAGTGGGAAGGGATTATGTGGTCCGATGACTGTGTTTTGCAGTACTTTGCACTGACAGCAGGGTGAAAGTGTGGTGCCAGATTCCCTTCTGCACCTTAAAAGCAAGTTGCTGTGAAGCTATGTCTTCCTTAAAAGTtataagttaaaataaatgacttgcATCGAATATAAGTTACAAATTGAACTATTTTGAAGACCATCAAGACTTTTCTTCTTGCTCCGCTCAGCTGCTGTGAGTGACTTCATATTGACAATGGATCAGAACTAAAGAAGCAGAGAATGGGCCACCGCTGGGCCCAGACAGCGCAGGCGAGGTCCCGAAACAGAGCCACACTGAGACCCCGTCCACAGGAGCCACATAATAATGTGTTATGGGACTCTGGGAGGCTGGGGAGATGGAGTCGAGGTGTATTTTTAGTAAAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010690 True 2628 mRNA 0.45 2 38978680 38983811

Neighbor

gene id symbol gene type direction distance location
AMCG00010689 NA coding upstream 15819 38934343 ~ 38962861 (+)
AMCG00010686 NA coding upstream 98542 38867798 ~ 38880138 (+)
AMCG00010685 NA coding upstream 201635 38738449 ~ 38777045 (+)
AMCG00010674 NA coding upstream 294321 38679808 ~ 38684359 (+)
AMCG00010675 NA coding upstream 302940 38672224 ~ 38675740 (+)
AMCG00010692 LOC104930938,LOC103371488,LOC107738919 coding downstream 91854 39075665 ~ 39087253 (+)
AMCG00010693 slc30a5,LOC102789045 coding downstream 174126 39157937 ~ 39167571 (+)
AMCG00010694 NA coding downstream 185310 39169121 ~ 39171541 (+)
AMCG00010696 LOC107661783 coding downstream 329294 39313105 ~ 39333836 (+)
AMCG00010705 NA coding downstream 428705 39412516 ~ 39435225 (+)
G82353 NA non-coding upstream 414397 38558466 ~ 38564283 (+)
G82339 NA non-coding upstream 495356 38477219 ~ 38483324 (+)
G82338 NA non-coding upstream 503572 38474850 ~ 38475108 (+)
G82285 NA non-coding upstream 553631 38423480 ~ 38425049 (+)
G82250 NA non-coding upstream 691152 38285579 ~ 38287528 (+)
G82468 NA non-coding downstream 43273 39027084 ~ 39027418 (+)
G82488 NA non-coding downstream 119109 39102920 ~ 39103266 (+)
G82495 NA non-coding downstream 167996 39151807 ~ 39152153 (+)
G82520 NA non-coding downstream 233016 39216827 ~ 39217078 (+)
G82521 NA non-coding downstream 236108 39219919 ~ 39220207 (+)
AMCG00010687 srek1,LOC107684347,LOC107730337,LOC107681054 other upstream 180794 38782079 ~ 38797886 (+)
AMCG00010681 trim23,LOC107558665,LOC106562204,LOC106568315 other upstream 338555 38636476 ~ 38640125 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other upstream 606029 38367669 ~ 38372651 (+)
AMCG00010655 NA other upstream 624718 38348278 ~ 38353962 (+)
AMCG00010648 NA other upstream 726670 38247021 ~ 38252010 (+)
AMCG00010695 NA other downstream 259046 39242857 ~ 39248625 (+)
G82671 NA other downstream 865135 39848946 ~ 39849369 (+)
G82723 NA other downstream 1063275 40047086 ~ 40049815 (+)
AMCG00010735 clg14h18orf25 other downstream 1568556 40552367 ~ 40566357 (+)
AMCG00010738 NA other downstream 1592935 40576746 ~ 40586122 (+)

Expression


Co-expression Network