AMCG00010692 (LOC104930938,LOC103371488,LOC107738919)


Basic Information

Item Value
gene id AMCG00010692
gene name LOC104930938,LOC103371488,LOC107738919
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 39075665 ~ 39087253 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010692
ATGCAAAATCGATTCGAGCCATCTAAAGAAGGAACGCGAGGTTCATCCTTGCTGGACTTGACAGAACAGTTCTTTGCATCAGAGACCGCCCCCCCCATCCTGGTGAAACTGGTGGAGGCCATTGAAAGAAAAGGTCTGGACTGTCCCACCCTGTACAGAAGTTTTGCATCGACTAGTGGACACGACATCCGGCAGTATTTAGAAAGTGATACTACTTCACAGGACTTGGACCAGTTTGACCTCCAGACCCTGTCCGAGGCCTTGAAAAAGTACCTGCAGGACCTCCCCCACCCTGTCATCCCCTCTGGGGTTTATGGGGAGCTGGTTCATGTAGCTCAAGaggtGCCGAACCCGGATGAGTGTGGGCAGCTGCTGAGGAGGATCGTCCGCTCACCCAACGTCCCTCACCAGTACTGGCTCACGCTCCACTACCTGATCAAGCATTTCTGCAGAGTCTCTCAAAACACAGGCAAAAACCTGCTGAGTGCCCGGGCCCTGGGCGAGATCTTCAGCCCTCTGCTCTTCAGACACCAGGCGGCCAGCTGCGATTCGAACCCAGAATACCACATCCGGATCATTGAGGTCTTCGTCATCAGCGAATGGAATGACAGCCAGGCTGCCCCAGCACTGCCTCCAAAACCACCGAAGCCTGCTCCAATCGCAAATAACGGCATGAATAACAATATGTCTCTGCAAGACGCCGAGTGGTACTGGGGAGATATCTCGAGGGAGGAAGTGAATGAGAAGCTGAGAGACACGCCAGATGGTACGTTCCTGGTCCGCGATGCCTCCACGAAAATGCACGGCGACTACACCCTCACGCTGAGGAAAGGCGGCAACAACAAGCTCATCAAGATCTTCCACCGAGACGGGAAGTACGGTTTCTCGGACCCACTGACTTTCATCTCCGTGGTCGAGCTCATAAACCACTACCGCCACGAGTCGCTGGCCCAGTACAATCCCAAACTCGATGTGAAGCTGCTGTACCCCGTGTCCAAACACCAGCAGgaccaggtggTGAAAGAGGACAACATCGAGGCCGTGGGGAAGAAACTCCATGAGTATCACCTGCAGTACcaggagaaaaacaaggaaTACGACCGGCTCTATGAGGAATACACGAGGACCTCGCAAGAGATCCAGATGAAAAGGACCGCCATCGAAGCTTTCAACGAAACCATCAAGATTTTCGAAGAGCAGTGCCAAACGCAGGAGAGGTACAGCAAAGAGTACATTGAGAAGTTCAGAAGGGAGGGGAATGAGAAGGAAATTCAGAGGATCATGGTGAACTACGAGAAGCTGAAGTCGCGCATCAGCGAGATTGTGGACAGCAAGCGCCGCCTGGAGGAGGACCTGAAGAAGCAGGCGGCCGACTACAGGGAGATCGACAAGAGGATGAACAGCATCAAGCCTGACCTAATCCAGCTCAGAAAGACCCGAGACCAATACCTGATGTGGCTGACTCAGAAGGGTGTGCGGCAGAAGAAGCTGAACGAGTGGCTGGGAATCAAGAACGAAAACACAGAAGACCAATACTCTATGGTGGAGGATGACGAGGACCTGCCCCACCATGACGAGCGCTCCTGGAAGCTGGGCAACATCAACCGGCCTCAGGCGGAAGGGTTGCTGCGGGGGAAACGGGACGGCACATTCCTGGTCCGGGACAGCAGCAAGCAAGGGTGCTATGCCTGTAGTGTTGTTGTCGAGGGCGAGGTGAAACACTGCGTCATCAACAAGACGCCCACGGGCTTTGGTTTTGCGGAGCCCTACAACCTGTATGCCTCACTGAAGGAGCTGGTCCTGCACTACCAGCACACGTCGCTCGTGCAGCACAACGACTCCCTGAACGTCACGCTGGCGTACCCAGTGTACGCGCACCAGCGGCGTTGA

Function

NR:

description
PREDICTED: phosphatidylinositol 3-kinase regulatory subunit alpha isoform X1

GO:

id name namespace
GO:0043551 regulation of phosphatidylinositol 3-kinase activity biological_process
GO:0007165 signal transduction biological_process
GO:0005942 phosphatidylinositol 3-kinase complex cellular_component
GO:0035014 phosphatidylinositol 3-kinase regulator activity molecular_function

KEGG:

id description
K02649 PIK3R1_2_3; phosphoinositide-3-kinase regulatory subunit alpha/beta/delta

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010692 True 1890 mRNA 0.55 15 39075665 39087253

Neighbor

gene id symbol gene type direction distance location
AMCG00010690 NA coding upstream 91854 38978680 ~ 38983811 (+)
AMCG00010689 NA coding upstream 112804 38934343 ~ 38962861 (+)
AMCG00010686 NA coding upstream 195527 38867798 ~ 38880138 (+)
AMCG00010685 NA coding upstream 298620 38738449 ~ 38777045 (+)
AMCG00010674 NA coding upstream 391306 38679808 ~ 38684359 (+)
AMCG00010693 slc30a5,LOC102789045 coding downstream 70684 39157937 ~ 39167571 (+)
AMCG00010694 NA coding downstream 81868 39169121 ~ 39171541 (+)
AMCG00010696 LOC107661783 coding downstream 225852 39313105 ~ 39333836 (+)
AMCG00010705 NA coding downstream 325263 39412516 ~ 39435225 (+)
AMCG00010706 NA coding downstream 348785 39436038 ~ 39444075 (+)
G82468 NA non-coding upstream 48247 39027084 ~ 39027418 (+)
G82353 NA non-coding upstream 511382 38558466 ~ 38564283 (+)
G82339 NA non-coding upstream 592341 38477219 ~ 38483324 (+)
G82338 NA non-coding upstream 600557 38474850 ~ 38475108 (+)
G82285 NA non-coding upstream 650616 38423480 ~ 38425049 (+)
G82488 NA non-coding downstream 15667 39102920 ~ 39103266 (+)
G82495 NA non-coding downstream 64554 39151807 ~ 39152153 (+)
G82520 NA non-coding downstream 129574 39216827 ~ 39217078 (+)
G82521 NA non-coding downstream 132666 39219919 ~ 39220207 (+)
G82523 NA non-coding downstream 148572 39235825 ~ 39238488 (+)
AMCG00010687 srek1,LOC107684347,LOC107730337,LOC107681054 other upstream 277779 38782079 ~ 38797886 (+)
AMCG00010681 trim23,LOC107558665,LOC106562204,LOC106568315 other upstream 435540 38636476 ~ 38640125 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other upstream 703014 38367669 ~ 38372651 (+)
AMCG00010655 NA other upstream 721703 38348278 ~ 38353962 (+)
AMCG00010648 NA other upstream 823655 38247021 ~ 38252010 (+)
AMCG00010695 NA other downstream 155604 39242857 ~ 39248625 (+)
G82671 NA other downstream 761693 39848946 ~ 39849369 (+)
G82723 NA other downstream 959833 40047086 ~ 40049815 (+)
AMCG00010735 clg14h18orf25 other downstream 1465114 40552367 ~ 40566357 (+)
AMCG00010738 NA other downstream 1489493 40576746 ~ 40586122 (+)

Expression


Co-expression Network