AMCG00010701


Basic Information

Item Value
gene id AMCG00010701
gene name NA
gene type coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 39499001 ~ 39505758 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010701
ATTCAACCCAGGCGAACGCTGAGGAAGTTGCCCCTCCAAGCCAACTTCTACCCGATGACGACCATGGCGTACCTTCAGGATAACCATGTCCGCATGACCCTGCATTCGGCGCAGTCTTTGGGGGTGTCCAGTCTGAAGCCTGgccAGCTAGAGGTCATCATGGACCGGCGCCTCATGCAGGACGACAACCGCGGGCTGGGCCAGGGTGTGCAGGACAACAAGGTCACGGCCAACCTGTTCCGCGTGCTCCTGGAGAGACGGGCAGAACCGAGAGAGGGAGACGACAGCCAGCCGCTGAGCTTCCCCTCCCTGCTGAGCCACATCACCTCCCTTTACCTGAACCACCCCGTCCTCCCCATGGCCGTCAGCCTCCACTTCGGGGCCGTGTCACTGTCGACCTTCAGCCCCCTGCTCTCCTCGCTGCCTTGTGACATCCATGTGGTCAACCTCCGCACCATACAGGCCCAGGAGGGAGTCGGTCCATCGGATGAAGCCGCCTTGATTCTGCACCGGAAGGGATTCGACTGTGGATTTGACACTAAAAACACTGGGCTGCTGTGCTCGACCACTCACGGCAAGGTAATCTGCCTGGAGAGAGAGATGAAAGTGCAGAGCCTCACCCCCGTGTCTTTATCTCTGATGCACACCCCCGATCAGGGCGGGAACGCAGACGAGATCCAGCTGAAGCCGATGGAGATCAGCACGTACCGGATCCGGCTGAGATGA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010701 True 726 mRNA 0.60 5 39499001 39505758

Neighbor

gene id symbol gene type direction distance location
AMCG00010702 NA coding upstream 10027 39479277 ~ 39488974 (+)
AMCG00010700 man2a1 coding upstream 35507 39456337 ~ 39463494 (+)
AMCG00010706 NA coding upstream 54926 39436038 ~ 39444075 (+)
AMCG00010705 NA coding upstream 63776 39412516 ~ 39435225 (+)
AMCG00010696 LOC107661783 coding upstream 165165 39313105 ~ 39333836 (+)
AMCG00010703 NA coding downstream 43764 39549522 ~ 39558213 (+)
AMCG00010707 NA coding downstream 69846 39575604 ~ 39593245 (+)
AMCG00010708 NA coding downstream 109378 39615136 ~ 39655340 (+)
AMCG00010715 NA coding downstream 297544 39803302 ~ 39803661 (+)
AMCG00010712 NA coding downstream 307674 39813432 ~ 39834594 (+)
G82548 NA non-coding upstream 124938 39371698 ~ 39374063 (+)
G82545 NA non-coding upstream 191847 39306929 ~ 39307154 (+)
G82523 NA non-coding upstream 260513 39235825 ~ 39238488 (+)
G82521 NA non-coding upstream 278794 39219919 ~ 39220207 (+)
G82520 NA non-coding upstream 281923 39216827 ~ 39217078 (+)
G82620 NA non-coding downstream 40783 39546541 ~ 39546879 (+)
G82637 NA non-coding downstream 172715 39678473 ~ 39695118 (+)
G82638 NA non-coding downstream 191795 39697553 ~ 39697774 (+)
G82639 NA non-coding downstream 193403 39699161 ~ 39699367 (+)
G82643 NA non-coding downstream 203405 39709163 ~ 39710896 (+)
AMCG00010695 NA other upstream 250376 39242857 ~ 39248625 (+)
AMCG00010687 srek1,LOC107684347,LOC107730337,LOC107681054 other upstream 701115 38782079 ~ 38797886 (+)
AMCG00010681 trim23,LOC107558665,LOC106562204,LOC106568315 other upstream 858876 38636476 ~ 38640125 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other upstream 1126350 38367669 ~ 38372651 (+)
AMCG00010655 NA other upstream 1145039 38348278 ~ 38353962 (+)
G82671 NA other downstream 343188 39848946 ~ 39849369 (+)
G82723 NA other downstream 541328 40047086 ~ 40049815 (+)
AMCG00010735 clg14h18orf25 other downstream 1046609 40552367 ~ 40566357 (+)
AMCG00010738 NA other downstream 1070988 40576746 ~ 40586122 (+)
G82939 rpl37 other downstream 1182759 40688517 ~ 40690850 (+)

Expression


Co-expression Network