AMCG00010735 (clg14h18orf25)


Basic Information

Item Value
gene id AMCG00010735
gene name clg14h18orf25
gene type misc
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 40552367 ~ 40566357 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>AMCG00010735
atggaaagaaacgGCAGGAAACCGGGCTCGGGGGCGCTGCTCCGCTCTCCCCACCGGCGGCGCCCGGGCGGCACTGAGCGCCCCGCCGGAAGTGACGCACTGGCCCCGAACAACGGCTCCGCTGACATTTTGAAACCCGCGCAGCCGAGCCGAGCGGACGCTGCTCTCCGCCGCGACCCGCCGTTTGCTGCCCGTGTTCTCCTGTCCAGCCCGGTCCAGCCAGTGTCCCCCAGTGCTCTATGCTCTGACACCTGGGGGAGGCCTTCGCACTCAACTGACATGAAGATGGCCGACACGGAGAAGACGGAAGAGCTTGTGGACTCCGAGACGCCCCCCGAGGCCCCTGCGGACCGGCCggcggcgggggggggggcagtggcaCGGGAGGACGAGCCCCTGAAGACTGAGACCTCCCCCTCGGAGAAGGAGGGAGACAGCCCCCTGCAGACGGACCCCAGCCTGATGTCCTCCATGCCCTGCCTGCTCATGGAGCTGCGCCGGGATTCCCCCGAGTCGCAGAGAGCGTCCACGGAGAGCGAGAAGCCGCCGTCCAACCGCACCTACGAGAGCGACTCCTCCAACCCCTGCCTGCTGTCGCCCTCCTCCAGCGGACACCTGGCCGACTCGGACACGCTGTCCTCGGGGGAGGAGGCCGCGGCGGGGGCCCGGGGCGCAGGCGGAGGGGCCGCCGAGGGGGCCGAGCCGGGCCTGGGGGCCGGGGGGCCGGCGGCAGTGGGGGGGCGCAAGTCCCGGCGCTCGCGGTCCGAGAGCGAGATGTCCAGCGCAGCCATGGCGGCCAAGAAGAACCGCTGGCAGGCGGTGGGCGGGGACAAGCACAACGGCCGGCTGGCCAAGGTCAAAGGGCAGCGCAGCCAGAAACACAAGCAGCGCATGCGGCTGCTGCGGCAGAAGAGAGAGGCGGCCGCCCGCAAGAAGTACAACCTGCTGCAGGACAGCAGTACCAGCGACAGCGACCTCACCTGCgactccagctccagctcctcgGACGACGACGACGAGGTGTCGGGCAGCAGCAAGACCATCACCGCCGACATCCCAGCTGGCTTCAGCCGCGCCGAGGGGCCATCAGGAGTGACCAGTCAAATTCAGGGACTGCTGGACAGCGGCACCTCCTGGGACCGCAACTGCATTGGCAATGTGCTGGAAGAGGCCATGAATCGCTTTGCAGTGATGCAGCGCCAGACGGAGGAGCGCTTCCGCATGTGGATGGAGAAGCTCACCCGGCTGGACACCGAGCAAGAGGCCAAGCTCACCCGGCTGGATGCCGAGCAAGATGCCAAGCTCCAGGGCGAGGCCGGGGAGCCCCGAGGGCACGTGATTGGCCAGCGGGTGTCGCCCGCCACGCAGCCCGGCGCGTTCATGCAGATGCCCGACAGCCACCTGCTCTCGCCGGACCTCTACAGCCCGTACCTCACGAGCCGCCACAACGCCAACGCCGAGTCCTGCCCCGGCcccttcaacaacaacaaccctcCCATGGCCAATGGGCCGGCGGTAATAGCACACTATGACATTTCTGACACTAATTCTGACCCCGAAGGTCTAAGTGTGGACAGTCTCCTTGCGGCCGCTGTAGCTCACGAACTAAAAACGTTCAGACCCCAGGGAGTGGGAGCAAATTCTTGGGCAAAAAAGGGGCACCTTGGCTCGAGTTGCGAAACAGGGCACATAGAGGCCCAGTTCGGACCCGGCGACCAGCAGACCTGTGGGCCTCTCCAGATCAAGGAGGAAATCAACATCGCCTCGACGGACAGTGAGGTGGAGATCGTGGGCGTGCAGGAGAACACGAGATGCGTTCACCCCCGGGGCGGCGTGATCCAGAGCCTCTCCTCCTGGAAGCACGGCGCCGTGGTCCAGTACAGCAGCGCCCGGCAGTCGCACCTCTGGACGGCCGTGTCCCCGCAGCCCAGCTGGGCGTCCCCACCCGAGGTGGTGGACCTGACGCTGGACGAGGACGCGAGACGCAAATACTTACTGTGA
>TU103450
GCTCCGCTGACATTTTGAAACCCGCGCAGCCGAGCCGAGCGGACGCTGCTCTCCGCCGCGACCCGCCGTTTGCTGCCCGTGTGAGCCGGCAAGCGCCGCAGACTATGATGCTGATTAAGCCGGGCACGTAAAATAAACCACATCAGCGCCCAGGTTCTCCTGTCCAGCCCGGTCCAGCCAGTGTCCCCCAGTGCTCTATGCTCTGACACCTGGGGGAGGCCTTCGCACTCAACTGACATGAAGATGGCCGACACGGAGAAGACGGAAGAGCTTGTGGACTCCGAGACGCCCCCCGAGGCCCCTGCGGACCGGCCggcggcgggggggggggcagtggcaCGGGAGGACGAGCCCCTGAAGACTGAGACCTCCCCCTCGGAGAAGGAGGGAGACAGCCCCCTGCAGACGGACCCCAGCCTGATGTCCTCCATGCCCTGCCTGCTCATGGAGCTGCGCCGGGATTCCCCCGAGTCGCAGAGAGCGTCCACGGAGAGCGAGAAGCCGCCGTCCAACCGCACCTACGAGAGCGACTCCTCCAACCCCTGCCTGCTGTCGCCCTCCTCCAGCGGACACCTGGCCGACTCGGACACGCTGTCCTCGGGGGAGGA

Function

NR:

description
PREDICTED: uncharacterized protein C18orf25 homolog isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
AMCG00010735 True 2001 mRNA 0.67 7 40552367 40566357
TU103450 False 608 TUCP 0.67 2 40552757 40554854

Neighbor

gene id symbol gene type direction distance location
AMCG00010736 NA coding upstream 222 40541787 ~ 40552145 (+)
AMCG00010737 NA coding upstream 26899 40522257 ~ 40525468 (+)
AMCG00010734 NA coding upstream 63178 40486321 ~ 40489189 (+)
AMCG00010722 NA coding upstream 475649 40061768 ~ 40076718 (+)
AMCG00010716 skiv2l2,LOC107571110,LOC107744101 coding upstream 579576 39917936 ~ 39972791 (+)
AMCG00010739 NA coding downstream 24926 40591283 ~ 40595042 (+)
AMCG00010745 NA coding downstream 126610 40692967 ~ 40693329 (+)
AMCG00010744 prkaa1 coding downstream 131511 40697868 ~ 40702200 (+)
AMCG00010747 NA coding downstream 140902 40707259 ~ 40708428 (+)
AMCG00010743 NA coding downstream 152942 40719299 ~ 40728299 (+)
G82854 LOC107575789,LOC100846954 non-coding upstream 243378 40308755 ~ 40308989 (+)
G82716 NA non-coding upstream 530743 40020867 ~ 40021624 (+)
G82702 NA non-coding upstream 577789 39974261 ~ 39974578 (+)
G82677 NA non-coding upstream 687059 39865033 ~ 39865308 (+)
G82670 NA non-coding upstream 704486 39846963 ~ 39847881 (+)
G82940 NA non-coding downstream 124538 40690895 ~ 40691478 (+)
G82968 NA non-coding downstream 210597 40776954 ~ 40777510 (+)
G82971 NA non-coding downstream 228738 40795095 ~ 40795556 (+)
G82974 NA non-coding downstream 266176 40832533 ~ 40832836 (+)
G83045 NA non-coding downstream 549502 41115859 ~ 41116188 (+)
G82723 NA other upstream 502552 40047086 ~ 40049815 (+)
G82671 NA other upstream 702998 39848946 ~ 39849369 (+)
AMCG00010695 NA other upstream 1303742 39242857 ~ 39248625 (+)
AMCG00010687 srek1,LOC107684347,LOC107730337,LOC107681054 other upstream 1754481 38782079 ~ 38797886 (+)
AMCG00010681 trim23,LOC107558665,LOC106562204,LOC106568315 other upstream 1912242 38636476 ~ 38640125 (+)
AMCG00010738 NA other downstream 10389 40576746 ~ 40586122 (+)
G82939 rpl37 other downstream 122160 40688517 ~ 40690850 (+)
G83001 NA other downstream 360822 40927179 ~ 40930030 (+)

Expression


Co-expression Network