G80208


Basic Information

Item Value
gene id G80208
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 26916541 ~ 26916839 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU100041
AGAatagttacattactaatgctaataatactgatgttgatacagatgaatagaaaaataactactattatctgtcttcacaggaacCAGCAAAAATGAATTTCCCTCCCTTGGAAACATACGATGCTTACCATAATATTGTGAAAGTGATAAACTAACTAACTCTGCTGATTCCAATTgacaacaggagggtggcgatGTCCAGGAATAGACGGACAGATTATTAACAATGCATTTCTGATTGATTTcaggtgctgaaaataacatacaattatCTTTCAGGAAAAGTTGGAGAAAGT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100041 True 299 lncRNA 0.34 1 26916541 26916839

Neighbor

gene id symbol gene type direction distance location
AMCG00010374 plppr1,LOC107653496,LOC107702599,LOC107710008,LOC107750956 coding upstream 164605 26747568 ~ 26751936 (+)
AMCG00010377 NA coding upstream 181023 26735297 ~ 26735518 (+)
AMCG00010372 NA coding upstream 278313 26622349 ~ 26638228 (+)
AMCG00010368 NA coding upstream 551480 26363239 ~ 26365061 (+)
AMCG00010353 kiaa1958,LOC107558658,LOC107685162 coding upstream 567211 26341343 ~ 26349330 (+)
AMCG00010378 NA coding downstream 1058 26917897 ~ 26921875 (+)
AMCG00010380 NA coding downstream 347946 27264785 ~ 27277753 (+)
AMCG00010382 epha5,LOC108428864,LOC107709147,LOC107702602 coding downstream 544203 27461042 ~ 27466622 (+)
AMCG00010381 NA coding downstream 592016 27508855 ~ 27509833 (+)
AMCG00010379 epha5,LOC108428864,LOC107567057,LOC107702602 coding downstream 608681 27525520 ~ 27548008 (+)
G80207 NA non-coding upstream 406 26915734 ~ 26916135 (+)
G80163 NA non-coding upstream 414267 26497769 ~ 26502274 (+)
G80140 NA non-coding upstream 506928 26404606 ~ 26409613 (+)
G80138 NA non-coding upstream 541185 26373652 ~ 26375356 (+)
G80032 NA non-coding upstream 789233 26127083 ~ 26127308 (+)
G80210 NA non-coding downstream 161450 27078289 ~ 27078504 (+)
G80217 NA non-coding downstream 286162 27203001 ~ 27203201 (+)
G80235 NA non-coding downstream 371740 27288579 ~ 27288856 (+)
G80264 NA non-coding downstream 878671 27795510 ~ 27796290 (+)
G80331 naa35 non-coding downstream 1019327 27936166 ~ 27937054 (+)
AMCG00010369 snx30,LOC107569385,LOC106591923 other upstream 513521 26380467 ~ 26403020 (+)
G80014 NA other upstream 890238 26012484 ~ 26026303 (+)
AMCG00010366 tal2,LOC106585373,LOC106580046 other upstream 920127 25992558 ~ 25996414 (+)
AMCG00010333 NA other upstream 2078989 24833071 ~ 24837552 (+)
AMCG00010320 LOC104946060 other upstream 2906688 23920760 ~ 24009853 (+)
G80249 NA other downstream 639576 27556415 ~ 27557007 (+)
AMCG00010393 isca1,LOC107662049 other downstream 952600 27869439 ~ 27874931 (+)
G80326 NA other downstream 989658 27906497 ~ 27906829 (+)
AMCG00010407 NA other downstream 1326150 28242989 ~ 28265443 (+)
AMCG00010431 NA other downstream 2577724 29494563 ~ 29503523 (+)

Expression


Co-expression Network