G80264


Basic Information

Item Value
gene id G80264
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 27795510 ~ 27796290 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU100103
gcattataatgtattatataaaatataccatTATACCATGGCATACAAAATGTTAGAAAAGACTCAAagtaatgatttattatttggaATAATAGAGaatagtcacaatctggaacaaactccccagtgatgtggtagaagctgaaaatttgggaacatttaaaaatagactggataggatccttggatcacttagatattaatggacaccaaacgagcacgatgggtcgaatggcctcctctcgtttgtaaactttcttatgttcttaaactcTTTTGGAATGTACTTTTATGTAATTTACTGCACCTGAAGTTTTGCGTCTGAGcttcattttcttattaaattTGTTAAGCACTCAGAAATGCCTATGcataaatacagcaaataaacatgcatttgttttgtattgaatcAATAGGTAAAGTCAGTTTTAGTGAAGTCTTTTTCACATTAATTATCTTAATAGTCTCAGGTTTTGTAGCCATTTGTAGCAAATGTTCACTTAGATttgtcttatttaatttatgtattttcatgttgttttcagtGTGCATGTTAAAATTGGAGTTCTCCACATTCATCCATGACAGTGCAATACAAAGCTGATAGAAATTAACTAATTAGACAAATTCATTTTGGGAAAATATAAAACCCTCGTGTCCCTAACCAGCGCATGTGTGAGCACACTCTGACCACAAGCatgaggtcagaggtcaaaagAAAAAGGCCTGTGAggagattaaatgtaaaatgaagaaaagattgtgtatgtgtttgttg

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100103 True 781 lncRNA 0.33 1 27795510 27796290

Neighbor

gene id symbol gene type direction distance location
AMCG00010390 NA coding upstream 183 27786437 ~ 27795327 (+)
AMCG00010383 NA coding upstream 20157 27763580 ~ 27775353 (+)
AMCG00010385 lpar1,LOC106568607,LOC107554848,LOC106572527 coding upstream 72139 27710613 ~ 27723371 (+)
AMCG00010379 epha5,LOC108428864,LOC107567057,LOC107702602 coding upstream 247502 27525520 ~ 27548008 (+)
AMCG00010381 NA coding upstream 285677 27508855 ~ 27509833 (+)
AMCG00010384 NA coding downstream 14118 27810408 ~ 27813573 (+)
AMCG00010395 NA coding downstream 55272 27851562 ~ 27867176 (+)
AMCG00010396 NA coding downstream 96320 27892610 ~ 27898498 (+)
AMCG00010392 NA coding downstream 123288 27919578 ~ 27933573 (+)
AMCG00010394 NA coding downstream 162417 27958707 ~ 28013490 (+)
G80235 NA non-coding upstream 506654 27288579 ~ 27288856 (+)
G80217 NA non-coding upstream 592309 27203001 ~ 27203201 (+)
G80210 NA non-coding upstream 717006 27078289 ~ 27078504 (+)
G80208 NA non-coding upstream 878671 26916541 ~ 26916839 (+)
G80207 NA non-coding upstream 879375 26915734 ~ 26916135 (+)
G80331 naa35 non-coding downstream 139876 27936166 ~ 27937054 (+)
G80362 NA non-coding downstream 225184 28021474 ~ 28021684 (+)
G80392 NA non-coding downstream 410031 28206321 ~ 28207268 (+)
G80468 NA non-coding downstream 928717 28725007 ~ 28725281 (+)
G80469 NA non-coding downstream 974937 28771227 ~ 28775463 (+)
G80249 NA other upstream 238503 27556415 ~ 27557007 (+)
AMCG00010369 snx30,LOC107569385,LOC106591923 other upstream 1392490 26380467 ~ 26403020 (+)
G80014 NA other upstream 1769207 26012484 ~ 26026303 (+)
AMCG00010366 tal2,LOC106585373,LOC106580046 other upstream 1799096 25992558 ~ 25996414 (+)
AMCG00010333 NA other upstream 2957958 24833071 ~ 24837552 (+)
AMCG00010393 isca1,LOC107662049 other downstream 73149 27869439 ~ 27874931 (+)
G80326 NA other downstream 110207 27906497 ~ 27906829 (+)
AMCG00010407 NA other downstream 446699 28242989 ~ 28265443 (+)
AMCG00010431 NA other downstream 1698273 29494563 ~ 29503523 (+)
AMCG00010467 NA other downstream 2970047 30766337 ~ 30817603 (+)

Expression


Co-expression Network