G80331 (naa35)


Basic Information

Item Value
gene id G80331
gene name naa35
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 27936166 ~ 27937054 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU100177
ttttaaaaatcgaAACTACATTTCAAGTGATTAGCGCTCACCTCTGGGTCTGGATTGGGGACATTTTCCAAGATCATCTTGGCTTGCTGGAAGTGTTTACTGGCTGCCATGTACAGGTCTGAAGACTGAGGAGGAGGGCTGTACTTATTCAGGTCAGACATTTCCTTAAATTGTATGTAATGCACTGGCGGAGGAGTCACAACACTGTTAAAAGGGGCAAAACGGTGCTCGTATCGGACCTGCTCGCTATCCAGCTCGAACTTTGGCTTTCTTACTTTCCCATCCATATCGAATGCAATCATTGTCTGGAAAAACCAAAAAGCAGTGGTTTGCTTCCATTAGAGattaattgtacatttgtgCCTCACTGCTCTCTTCACCTCATCCCCTGCATCCttgaaaacatcaaaatattttactaGTGTTTACTTTGAAAGGGATTTAGAGAGATTTAGAGCAAAGGGGATTATGGCTAATTGTCTAGATGAAGTATGAACAAGGCTCAACCTAATT

Function

symbol description
naa35 Acts upstream of or within several processes, including blood vessel morphogenesis; regulation of TOR signaling; and somitogenesis. Predicted to be located in cytoplasm. Predicted to be part of NatC complex. Is expressed in blood vasculature; epidermis; and head. Orthologous to human NAA35 (N-alpha-acetyltransferase 35, NatC auxiliary subunit).

NR:

description
PREDICTED: N-alpha-acetyltransferase 35, NatC auxiliary subunit isoform X2

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100177 True 513 lncRNA 0.42 2 27936166 27937054

Neighbor

gene id symbol gene type direction distance location
AMCG00010392 NA coding upstream 2593 27919578 ~ 27933573 (+)
AMCG00010396 NA coding upstream 37668 27892610 ~ 27898498 (+)
AMCG00010395 NA coding upstream 68990 27851562 ~ 27867176 (+)
AMCG00010384 NA coding upstream 122593 27810408 ~ 27813573 (+)
AMCG00010390 NA coding upstream 140839 27786437 ~ 27795327 (+)
AMCG00010394 NA coding downstream 21653 27958707 ~ 28013490 (+)
AMCG00010402 NA coding downstream 219202 28156256 ~ 28169012 (+)
AMCG00010404 hnrpkl,LOC107728199,LOC107691775,LOC107600582,LOC105890375 coding downstream 254528 28191582 ~ 28206181 (+)
AMCG00010401 NA coding downstream 272958 28210012 ~ 28212808 (+)
AMCG00010403 NA coding downstream 278802 28215856 ~ 28232465 (+)
G80264 NA non-coding upstream 139876 27795510 ~ 27796290 (+)
G80235 NA non-coding upstream 647310 27288579 ~ 27288856 (+)
G80217 NA non-coding upstream 732965 27203001 ~ 27203201 (+)
G80210 NA non-coding upstream 857662 27078289 ~ 27078504 (+)
G80208 NA non-coding upstream 1019327 26916541 ~ 26916839 (+)
G80362 NA non-coding downstream 84420 28021474 ~ 28021684 (+)
G80392 NA non-coding downstream 269267 28206321 ~ 28207268 (+)
G80468 NA non-coding downstream 787953 28725007 ~ 28725281 (+)
G80469 NA non-coding downstream 834173 28771227 ~ 28775463 (+)
G80487 NA non-coding downstream 940770 28877824 ~ 28878359 (+)
G80326 NA other upstream 29337 27906497 ~ 27906829 (+)
AMCG00010393 isca1,LOC107662049 other upstream 61235 27869439 ~ 27874931 (+)
G80249 NA other upstream 379159 27556415 ~ 27557007 (+)
AMCG00010369 snx30,LOC107569385,LOC106591923 other upstream 1533146 26380467 ~ 26403020 (+)
G80014 NA other upstream 1909863 26012484 ~ 26026303 (+)
AMCG00010407 NA other downstream 305935 28242989 ~ 28265443 (+)
AMCG00010431 NA other downstream 1557509 29494563 ~ 29503523 (+)
AMCG00010467 NA other downstream 2829283 30766337 ~ 30817603 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other downstream 4536979 32474033 ~ 32530266 (+)
AMCG00010529 NA other downstream 5966761 33903815 ~ 33938237 (+)

Expression


Co-expression Network