G80392


Basic Information

Item Value
gene id G80392
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 28206321 ~ 28207268 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU100254
CCTTTTTCTTAGGTGACTTAGATGATTTTATAAACACCTGAATACATCCCACAGGATTATATGTCTCTAACATTTCACTCATCCTGGGTGCCTGAAGACTATACATATACTTGCACATACAAAATCCCTGctcaactttaaaatgtatttgttgcacTTGCATGTTTCTTGTGTACAGCACCATATCTTAAATATCCTCTTGAGAGagtgatttgtttaaaaatacacacacacaatctaaaTCTGTATGATGGTATCCTAGGAGTCTGTTTACTTCCTTGCTTTTGAAAGGGATTAGTCAAGGGTAACCCAGTGGTGCTCTGGGGGGTTTTTGTTGGAGAATGTGCACAGGTACCCAATGGTAGCAGTCCTTTTTGGTGAAGCTTGATGCCAGAAGCagaggtttttttgtttttgttttttttgcagagaCTGATGAGACTCCGCTGGTTCAAATCACAGTCCACACTGAAGGCTTGgcattgcatattttaaaatgaaacaaaccctGCAAAATACCTCTTGGAATACGCTGCTGTGGCACAAAATGGCAGACCATGATCCTGCTATCATCTACAGCATTGAAGTGTACTGTTGTACAACAATGTATTAACCCTGCTCATATTTGCCAATTCTATGCACCCTTTCAAATGTAAGGTGTACATGTACAGTTATCATGTATAGTACAACATATTGATAGACTTTGGTCCTCTCACTGCTGGTGATGGTACTAATGAAGGAGCCTAAATTAATACAACAACAGTAATTGATGAATAAGTGcattataaatgttaatttaccttcattaatttgaattcttCCTTCTACCTAGAGAATGTGTGACTGGGGGTGGTACCAATAGTGCAACcccttgtatttttatttgagaaagttaatttattttcatacaatGTTATTACTTTTAGAGTTGTTACAGCTCATTCCCTG

Function

GO: NA

KEGG:

id description
ko05032 Morphine addiction

RNA

RNA id representative length rna type GC content exon number start site end site
TU100254 True 948 lncRNA 0.37 1 28206321 28207268

Neighbor

gene id symbol gene type direction distance location
AMCG00010404 hnrpkl,LOC107728199,LOC107691775,LOC107600582,LOC105890375 coding upstream 140 28191582 ~ 28206181 (+)
AMCG00010402 NA coding upstream 37309 28156256 ~ 28169012 (+)
AMCG00010394 NA coding upstream 192831 27958707 ~ 28013490 (+)
AMCG00010392 NA coding upstream 272748 27919578 ~ 27933573 (+)
AMCG00010396 NA coding upstream 307823 27892610 ~ 27898498 (+)
AMCG00010401 NA coding downstream 2744 28210012 ~ 28212808 (+)
AMCG00010403 NA coding downstream 8588 28215856 ~ 28232465 (+)
AMCG00010400 LOC107562640 coding downstream 25676 28232944 ~ 28242085 (+)
AMCG00010408 NA coding downstream 96024 28303292 ~ 28334876 (+)
AMCG00010409 NA coding downstream 132612 28339880 ~ 28371632 (+)
G80362 NA non-coding upstream 184637 28021474 ~ 28021684 (+)
G80331 naa35 non-coding upstream 269267 27936166 ~ 27937054 (+)
G80264 NA non-coding upstream 410031 27795510 ~ 27796290 (+)
G80235 NA non-coding upstream 917465 27288579 ~ 27288856 (+)
G80217 NA non-coding upstream 1003120 27203001 ~ 27203201 (+)
G80468 NA non-coding downstream 517739 28725007 ~ 28725281 (+)
G80469 NA non-coding downstream 563959 28771227 ~ 28775463 (+)
G80487 NA non-coding downstream 670556 28877824 ~ 28878359 (+)
G80489 NA non-coding downstream 692901 28900169 ~ 28994462 (+)
G80491 NA non-coding downstream 749004 28956272 ~ 29023473 (+)
G80326 NA other upstream 299492 27906497 ~ 27906829 (+)
AMCG00010393 isca1,LOC107662049 other upstream 331390 27869439 ~ 27874931 (+)
G80249 NA other upstream 649314 27556415 ~ 27557007 (+)
AMCG00010369 snx30,LOC107569385,LOC106591923 other upstream 1803301 26380467 ~ 26403020 (+)
G80014 NA other upstream 2180018 26012484 ~ 26026303 (+)
AMCG00010407 NA other downstream 35721 28242989 ~ 28265443 (+)
AMCG00010431 NA other downstream 1287295 29494563 ~ 29503523 (+)
AMCG00010467 NA other downstream 2559069 30766337 ~ 30817603 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other downstream 4266765 32474033 ~ 32530266 (+)
AMCG00010529 NA other downstream 5696547 33903815 ~ 33938237 (+)

Expression


Co-expression Network