G80491


Basic Information

Item Value
gene id G80491
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 28956272 ~ 29023473 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU100392
ataataataataataataataataataataataataataataataatgtttaacgTAGCGTTATTTTCTTTGACTTGGTCAATGCTTATTATTTTTCgcgttttgcttttaaaatataagaaagACAGCTGTATTACTTTTTGCTGAATTGTGCTTTTTCATCCACAGGCtagctgtgtgtgcgtgttgttTCCTTCAGTCTGTCAGATTCTCCCCTCCCCGCTTCCCAACGTCACTTTGCTGGGAGTGGATGGTGTGTATAATAAAGTTACAGGCGCGGAATAGAGGAAAGGGGGAAAGAGAATATCTGCTGTCAGTTACATTTGATGCAAACTCTTTGAACACGACACTTCTCTATGGACATTTCCTGGACTGTTACTATATTACTTGTTTTGCGAGTCATGTACCTGGGGTCCTGATCCGTTTTTTTCCTTGGGGTTTCATCTGGAGAGATGTGTATTCCCGTCCAGTAGTGGAGTGGAGCGGACTGGAGTGAAAGTCCGCCATATTCTGCTTTTACCACGCCCGGGAACCCAGCAATTGAAAAAAGGCTGTGTGTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU100392 True 560 lncRNA 0.40 2 28956272 29023473

Neighbor

gene id symbol gene type direction distance location
AMCG00010414 tle1 coding upstream 373347 28561146 ~ 28582925 (+)
AMCG00010411 rasef,LOC106580191 coding upstream 556881 28396667 ~ 28399391 (+)
AMCG00010410 NA coding upstream 567103 28376842 ~ 28389169 (+)
AMCG00010409 NA coding upstream 584640 28339880 ~ 28371632 (+)
AMCG00010408 NA coding upstream 621396 28303292 ~ 28334876 (+)
AMCG00010424 gnaq,LOC106523804,LOC104920278,LOC103361005,LOC103398708,LOC103397278 coding downstream 24713 29048186 ~ 29060040 (+)
AMCG00010423 NA coding downstream 71864 29095337 ~ 29107346 (+)
AMCG00010421 NA coding downstream 199843 29223316 ~ 29228983 (+)
AMCG00010420 NA coding downstream 225979 29249452 ~ 29251205 (+)
AMCG00010422 NA coding downstream 249738 29273211 ~ 29283590 (+)
G80487 NA non-coding upstream 77913 28877824 ~ 28878359 (+)
G80469 NA non-coding upstream 180809 28771227 ~ 28775463 (+)
G80468 NA non-coding upstream 230991 28725007 ~ 28725281 (+)
G80392 NA non-coding upstream 749004 28206321 ~ 28207268 (+)
G80362 NA non-coding upstream 934588 28021474 ~ 28021684 (+)
G80490 NA non-coding downstream 38311 29061784 ~ 29064373 (+)
G80519 NA non-coding downstream 85724 29109197 ~ 29110019 (+)
G80521 NA non-coding downstream 92359 29115832 ~ 29118058 (+)
G80567 NA non-coding downstream 274685 29298158 ~ 29303550 (+)
G80580 pcsk5,LOC106580081,LOC107548272,LOC107723238 non-coding downstream 328681 29352154 ~ 29357030 (+)
AMCG00010407 NA other upstream 690829 28242989 ~ 28265443 (+)
G80326 NA other upstream 1049443 27906497 ~ 27906829 (+)
AMCG00010393 isca1,LOC107662049 other upstream 1081341 27869439 ~ 27874931 (+)
G80249 NA other upstream 1399265 27556415 ~ 27557007 (+)
AMCG00010369 snx30,LOC107569385,LOC106591923 other upstream 2553252 26380467 ~ 26403020 (+)
AMCG00010431 NA other downstream 471090 29494563 ~ 29503523 (+)
AMCG00010467 NA other downstream 1742864 30766337 ~ 30817603 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other downstream 3450560 32474033 ~ 32530266 (+)
AMCG00010529 NA other downstream 4880342 33903815 ~ 33938237 (+)
G81496 NA other downstream 5677965 34701438 ~ 34707394 (+)

Expression


Co-expression Network