G80663



Basic Information


Item Value
gene id G80663
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 29858773 ~ 29860382 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU100619
ATACTATTCAGCTTCtcgtaatatacactcacctaaaggattattaggaacaccatactaatactgtgtttgaccccctttcgccttcagaactgccttaattctacgtggcattgattcaacaaggtgctgaaagcattctttagaaatgttggcccatattgataggatagcatcttgcagttgatggagatttgtgggatgcacatccagggcacgaagctcccgttccaccacatcccaaagatgctctattgggttgagatctggtgactgtgggggccagtttagtacagtgttcctaataatcctt

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU100619 True 313 lncRNA 0.43 2 29858773 29860382

Neighbor


gene id symbol gene type direction distance location
AMCG00010437 NA coding upstream 44683 29799240 ~ 29814090 (+)
AMCG00010434 NA coding upstream 307235 29527784 ~ 29551538 (+)
AMCG00010432 carnmt1,LOC107673371,LOC107599972 coding upstream 334257 29515759 ~ 29524516 (+)
AMCG00010433 NA coding upstream 345355 29509642 ~ 29513418 (+)
AMCG00010425 rfk coding upstream 541217 29315300 ~ 29317556 (+)
AMCG00010440 NA coding downstream 54211 29914593 ~ 29926083 (+)
AMCG00010448 abhd17b,LOC103022021,LOC107599913,LOC106580059 coding downstream 121808 29982190 ~ 29983125 (+)
AMCG00010447 NA coding downstream 131550 29991932 ~ 30021803 (+)
AMCG00010449 LOC107393780,LOC105014492 coding downstream 326554 30186936 ~ 30208135 (+)
AMCG00010446 trpm3,LOC108434489,LOC108255677 coding downstream 365309 30225691 ~ 30253139 (+)
G80652 NA non-coding upstream 82974 29771427 ~ 29775799 (+)
G80599 NA non-coding upstream 374432 29483291 ~ 29484341 (+)
G80595 NA non-coding upstream 400795 29443110 ~ 29457978 (+)
G80580 pcsk5,LOC106580081,LOC107548272,LOC107723238 non-coding upstream 501743 29352154 ~ 29357030 (+)
G80567 NA non-coding upstream 555223 29298158 ~ 29303550 (+)
G80746 NA non-coding downstream 446103 30306485 ~ 30307387 (+)
G80830 NA non-coding downstream 656891 30517273 ~ 30519628 (+)
G80969 NA non-coding downstream 1186344 31046726 ~ 31070527 (+)
G80988 NA non-coding downstream 1246678 31107060 ~ 31107603 (+)
G80989 NA non-coding downstream 1249386 31109768 ~ 31110142 (+)
AMCG00010431 NA other upstream 355250 29494563 ~ 29503523 (+)
AMCG00010407 NA other upstream 1593330 28242989 ~ 28265443 (+)
G80326 NA other upstream 1951944 27906497 ~ 27906829 (+)
AMCG00010393 isca1,LOC107662049 other upstream 1983842 27869439 ~ 27874931 (+)
G80249 NA other upstream 2301766 27556415 ~ 27557007 (+)
AMCG00010467 NA other downstream 905955 30766337 ~ 30817603 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other downstream 2613651 32474033 ~ 32530266 (+)
AMCG00010529 NA other downstream 4043433 33903815 ~ 33938237 (+)
G81496 NA other downstream 4841056 34701438 ~ 34707394 (+)
AMCG00010545 megf10 other downstream 4896137 34756519 ~ 34845876 (+)

Expression



Co-expression Network