G80746



Basic Information


Item Value
gene id G80746
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information


Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 30306485 ~ 30307387 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence


>TU100718
TCTGATACATATCCACAAGTGCTTTGCTCAAACGTGCAGGATCCTGGTAGCTGCTGCTGTGCACTGACAGACAGCAAaCTTGCAGTATCAAGACACAAAGAGAGAGCATTGCAGCACTGTATTGAAGAAGCAGGAGGAAAGGTCCACTGAAGTAATTGTTCTCTGTTTCTCAAGAAGTCAAAGGAAGGGAAACCAAGGCATGCATTTGCATTAAGGAGGCAGAGTATCTTTGACAATCAACTTCTCGTTGTTTTCCTGAGAGACAAAACGGAATTAAACAatgattttttgtgttttaatgatttttgtagTCATCACATTAATATGGTTTAATCTCAGCTGTGAGACTGCAGCTGGCATGCTGCTGAGTGCTccgaagagggagggaggctcTGTAATACATACCAGATCCTCAAGGCTACACCTCTAAGGAAAGTGCATGTTCATCAGTCTCTTTTTTTCTACAACATAAGAGTAAAACAGACAAGCATGGTTCACATTTCTGCATAAATTATCTAGCCGGTCTCTTGTATTCGACCTATTTTTCCTGCTGGTTCATTGTTTCATTTCTTTGCAAACAGAGG

Function


GO: NA

KEGG: NA

RNA


RNA id representative length rna type GC content exon number start site end site
TU100718 True 584 lncRNA 0.41 2 30306485 30307387

Neighbor


gene id symbol gene type direction distance location
AMCG00010445 NA coding upstream 34822 30264723 ~ 30271663 (+)
AMCG00010446 trpm3,LOC108434489,LOC108255677 coding upstream 53346 30225691 ~ 30253139 (+)
AMCG00010449 LOC107393780,LOC105014492 coding upstream 98350 30186936 ~ 30208135 (+)
AMCG00010447 NA coding upstream 284682 29991932 ~ 30021803 (+)
AMCG00010448 abhd17b,LOC103022021,LOC107599913,LOC106580059 coding upstream 323360 29982190 ~ 29983125 (+)
AMCG00010450 LOC106943757 coding downstream 24606 30331993 ~ 30344815 (+)
AMCG00010455 apba1,apba2 coding downstream 96117 30403504 ~ 30429312 (+)
AMCG00010457 unc45b coding downstream 278554 30585941 ~ 30602893 (+)
AMCG00010456 NA coding downstream 299942 30607329 ~ 30611581 (+)
AMCG00010468 NA coding downstream 379580 30686967 ~ 30697621 (+)
G80663 NA non-coding upstream 446103 29858773 ~ 29860382 (+)
G80652 NA non-coding upstream 530686 29771427 ~ 29775799 (+)
G80599 NA non-coding upstream 822144 29483291 ~ 29484341 (+)
G80595 NA non-coding upstream 848507 29443110 ~ 29457978 (+)
G80580 pcsk5,LOC106580081,LOC107548272,LOC107723238 non-coding upstream 949455 29352154 ~ 29357030 (+)
G80830 NA non-coding downstream 209886 30517273 ~ 30519628 (+)
G80969 NA non-coding downstream 739339 31046726 ~ 31070527 (+)
G80988 NA non-coding downstream 799673 31107060 ~ 31107603 (+)
G80989 NA non-coding downstream 802381 31109768 ~ 31110142 (+)
G81020 NA non-coding downstream 1251329 31558716 ~ 31627547 (+)
AMCG00010431 NA other upstream 802962 29494563 ~ 29503523 (+)
AMCG00010407 NA other upstream 2041042 28242989 ~ 28265443 (+)
G80326 NA other upstream 2399656 27906497 ~ 27906829 (+)
AMCG00010393 isca1,LOC107662049 other upstream 2431554 27869439 ~ 27874931 (+)
G80249 NA other upstream 2749478 27556415 ~ 27557007 (+)
AMCG00010467 NA other downstream 458950 30766337 ~ 30817603 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other downstream 2166646 32474033 ~ 32530266 (+)
AMCG00010529 NA other downstream 3596428 33903815 ~ 33938237 (+)
G81496 NA other downstream 4394051 34701438 ~ 34707394 (+)
AMCG00010545 megf10 other downstream 4449132 34756519 ~ 34845876 (+)

Expression



Co-expression Network