G80988


Basic Information

Item Value
gene id G80988
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 31107060 ~ 31107603 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU101022
tgtaaaataaacacataaataaagctctcaattaaatatattttctattgcaTCCTAAATGACATACATTGCTAATATAATGTTCACATTTTCCTGAGTGTGACATGAATTTAAAATGGCATATAACTTGCATTTTCTGCTGGTTCAATTTGGGTGCTGTGGTGTTTGAAGCGAATCCATGGTTATGGATGGTCAATGAACcactcagaaaaaaaaaaaaaaaactgagcagGAATTCAGAACACGTCTTAAAGAAATCAACAATATGCCTCTGCCAAGGGCCCACACATGTAATCTCCCAGACAGTGGAGTCATTTTACAAATCAAACCACAGTCTGGTGTTAGAGAGGGATTTCCAGTTTGCAATAATAGGATGCAATTTGCAAACGCATGCAATATCTGAcattccattttaaaacaatttcaccTCGTAAGACCTGCAGAATTAAAAGGTTGTATTATTGACAGAAcctttgtattttttgaaacatttaataacacaaacaaTAGTCTGCTCAGTTTTTGAAtatccaattaaaaataa

Function

NR:

description
PREDICTED: cathepsin B-like

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101022 True 544 lncRNA 0.33 1 31107060 31107603

Neighbor

gene id symbol gene type direction distance location
AMCG00010480 NA coding upstream 19126 31082883 ~ 31087934 (+)
AMCG00010477 NA coding upstream 35440 31064637 ~ 31071620 (+)
AMCG00010476 NA coding upstream 66867 31037640 ~ 31040193 (+)
AMCG00010475 NA coding upstream 94232 30993603 ~ 31012828 (+)
AMCG00010474 NA coding upstream 179520 30892385 ~ 30927540 (+)
AMCG00010483 NA coding downstream 6919 31114522 ~ 31119247 (+)
AMCG00010486 LOC104966306,LOC106585191,LOC100702629,LOC103397673 coding downstream 322106 31429709 ~ 31589396 (+)
AMCG00010484 NA coding downstream 808981 31916584 ~ 31921133 (+)
AMCG00010485 NA coding downstream 817319 31924922 ~ 31938388 (+)
AMCG00010495 NA coding downstream 1002304 32109907 ~ 32126004 (+)
G80969 NA non-coding upstream 36533 31046726 ~ 31070527 (+)
G80830 NA non-coding upstream 587432 30517273 ~ 30519628 (+)
G80746 NA non-coding upstream 799673 30306485 ~ 30307387 (+)
G80663 NA non-coding upstream 1246678 29858773 ~ 29860382 (+)
G80652 NA non-coding upstream 1331261 29771427 ~ 29775799 (+)
G80989 NA non-coding downstream 2165 31109768 ~ 31110142 (+)
G81020 NA non-coding downstream 451113 31558716 ~ 31627547 (+)
G81026 NA non-coding downstream 664551 31772154 ~ 31772357 (+)
G81029 NA non-coding downstream 814146 31921749 ~ 31922050 (+)
G81089 NA non-coding downstream 1198690 32306293 ~ 32308293 (+)
AMCG00010467 NA other upstream 289457 30766337 ~ 30817603 (+)
AMCG00010431 NA other upstream 1603537 29494563 ~ 29503523 (+)
AMCG00010407 NA other upstream 2841617 28242989 ~ 28265443 (+)
G80326 NA other upstream 3200231 27906497 ~ 27906829 (+)
AMCG00010393 isca1,LOC107662049 other upstream 3232129 27869439 ~ 27874931 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other downstream 1366430 32474033 ~ 32530266 (+)
AMCG00010529 NA other downstream 2796212 33903815 ~ 33938237 (+)
G81496 NA other downstream 3593835 34701438 ~ 34707394 (+)
AMCG00010545 megf10 other downstream 3648916 34756519 ~ 34845876 (+)
G81576 NA other downstream 3904712 35012315 ~ 35012693 (+)

Expression


Co-expression Network