G80989


Basic Information

Item Value
gene id G80989
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 31109768 ~ 31110142 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU101023
GTAGCCATCCGTCTGCCTTCATTAGGAAACATGTATCATTAGAAACCAGCCATACTTACAAAGATGTGTTCATAATAACGCACCAATGAATCTCTAACCTACTGACTTGCTTAGGAAAAAATGCTTCTTACCCTAACAAAAATTACGATCGCCTTCTTGTCCTGATATAAACCTCTAAAAGGTATCCGGTTTCCATGCTCATTGTATACAAAGCAATCGTCAGTGTCTGATATCTGAAGTGCAgcaatgcttttctgtttttccagcGGGGATCTGCCAATCTGCTGTGTTACTGGAGGATCTGTAGCCATCTTTTATTTGATTGCAGCTCACAACTTTTCTCAAGTCCTTTGCCCTGGCTATTTTGGGCTGTGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101023 True 375 lncRNA 0.41 1 31109768 31110142

Neighbor

gene id symbol gene type direction distance location
AMCG00010480 NA coding upstream 21834 31082883 ~ 31087934 (+)
AMCG00010477 NA coding upstream 38148 31064637 ~ 31071620 (+)
AMCG00010476 NA coding upstream 69575 31037640 ~ 31040193 (+)
AMCG00010475 NA coding upstream 96940 30993603 ~ 31012828 (+)
AMCG00010474 NA coding upstream 182228 30892385 ~ 30927540 (+)
AMCG00010483 NA coding downstream 4380 31114522 ~ 31119247 (+)
AMCG00010486 LOC104966306,LOC106585191,LOC100702629,LOC103397673 coding downstream 319567 31429709 ~ 31589396 (+)
AMCG00010484 NA coding downstream 806442 31916584 ~ 31921133 (+)
AMCG00010485 NA coding downstream 814780 31924922 ~ 31938388 (+)
AMCG00010495 NA coding downstream 999765 32109907 ~ 32126004 (+)
G80988 NA non-coding upstream 2165 31107060 ~ 31107603 (+)
G80969 NA non-coding upstream 39241 31046726 ~ 31070527 (+)
G80830 NA non-coding upstream 590140 30517273 ~ 30519628 (+)
G80746 NA non-coding upstream 802381 30306485 ~ 30307387 (+)
G80663 NA non-coding upstream 1249386 29858773 ~ 29860382 (+)
G81020 NA non-coding downstream 448574 31558716 ~ 31627547 (+)
G81026 NA non-coding downstream 662012 31772154 ~ 31772357 (+)
G81029 NA non-coding downstream 811607 31921749 ~ 31922050 (+)
G81089 NA non-coding downstream 1196151 32306293 ~ 32308293 (+)
G81103 NA non-coding downstream 1262321 32372463 ~ 32372866 (+)
AMCG00010467 NA other upstream 292165 30766337 ~ 30817603 (+)
AMCG00010431 NA other upstream 1606245 29494563 ~ 29503523 (+)
AMCG00010407 NA other upstream 2844325 28242989 ~ 28265443 (+)
G80326 NA other upstream 3202939 27906497 ~ 27906829 (+)
AMCG00010393 isca1,LOC107662049 other upstream 3234837 27869439 ~ 27874931 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other downstream 1363891 32474033 ~ 32530266 (+)
AMCG00010529 NA other downstream 2793673 33903815 ~ 33938237 (+)
G81496 NA other downstream 3591296 34701438 ~ 34707394 (+)
AMCG00010545 megf10 other downstream 3646377 34756519 ~ 34845876 (+)
G81576 NA other downstream 3902173 35012315 ~ 35012693 (+)

Expression


Co-expression Network