G81372


Basic Information

Item Value
gene id G81372
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 34032704 ~ 34035798 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU101528
GAGAAAACTTCTTCTGCTACAGATAAAAGAGGCTCAGGCTCAGAACAGCTTTCAAAGGCCATCTTCAGACTGCCGTCATCTTCCGAGGTCCCAGGATAAGACGGAGCCCAGTGTCCACCCGTTGGCAGATGATGAATCCGCACAATCAACACATGCTGTCAAATCTGACGCAGGCAACCTCAGTGAACAGCCAAACCAGGATTTTCTGGTGCCTAAAGGATCACGTGACGATCCATCAGAAAATCCAAAAACGGAACACGTGTC

Function

GO: NA

KEGG:

id description
ko04142 Lysosome

RNA

RNA id representative length rna type GC content exon number start site end site
TU101528 True 264 lncRNA 0.49 3 34032704 34035798

Neighbor

gene id symbol gene type direction distance location
AMCG00010523 NA coding upstream 32850 33975202 ~ 33999854 (+)
AMCG00010524 NA coding upstream 78089 33950962 ~ 33954615 (+)
AMCG00010520 hsd17b4 coding upstream 362524 33659817 ~ 33670180 (+)
AMCG00010518 NA coding upstream 393748 33617022 ~ 33638956 (+)
AMCG00010517 NA coding upstream 424625 33601543 ~ 33608079 (+)
AMCG00010526 snx2 coding downstream 3981 34039779 ~ 34057802 (+)
AMCG00010530 NA coding downstream 22068 34057866 ~ 34083688 (+)
AMCG00010527 NA coding downstream 48096 34083894 ~ 34085059 (+)
AMCG00010528 NA coding downstream 59353 34095151 ~ 34099552 (+)
AMCG00010522 prdm6,LOC102788536 coding downstream 79338 34115136 ~ 34120020 (+)
G81279 NA non-coding upstream 717135 33310852 ~ 33315569 (+)
G81226 NA non-coding upstream 1004744 33026897 ~ 33027960 (+)
G81215 NA non-coding upstream 1064197 32968261 ~ 32968507 (+)
G81149 NA non-coding upstream 1358050 32576649 ~ 32674654 (+)
G81115 NA non-coding upstream 1564441 32467842 ~ 32468263 (+)
G81383 NA non-coding downstream 67040 34102838 ~ 34104640 (+)
G81407 NA non-coding downstream 160269 34196067 ~ 34196426 (+)
G81474 NA non-coding downstream 644178 34679976 ~ 34680716 (+)
G81479 aldh7a1,LOC102786701 non-coding downstream 648491 34684289 ~ 34685762 (+)
G81489 NA non-coding downstream 659061 34694859 ~ 34696304 (+)
AMCG00010529 NA other upstream 94467 33903815 ~ 33938237 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other upstream 1502438 32474033 ~ 32530266 (+)
AMCG00010467 NA other upstream 3215101 30766337 ~ 30817603 (+)
AMCG00010431 NA other upstream 4529181 29494563 ~ 29503523 (+)
AMCG00010407 NA other upstream 5767261 28242989 ~ 28265443 (+)
G81496 NA other downstream 665640 34701438 ~ 34707394 (+)
AMCG00010545 megf10 other downstream 720721 34756519 ~ 34845876 (+)
G81576 NA other downstream 976517 35012315 ~ 35012693 (+)
AMCG00010562 NA other downstream 1434537 35470335 ~ 35477590 (+)
AMCG00010563 cdc42se2 other downstream 1445002 35480800 ~ 35526224 (+)

Expression


Co-expression Network