G81407


Basic Information

Item Value
gene id G81407
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 34196067 ~ 34196426 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU101567
ttgaatgccttgaagcccaatttccacttgtgtccccgggtgcgtgtgtccctgctgatctggaaaagctcctctggtttgatgtggtcgatgcctttcatgattttgaagacttgaatcaagtccccacatagtctcctctgttccagggtgaaaaggttcagttcctcagtctctcagtaggacattcccttcagacctggaataagtctggttgctctcctctgaactgcctctagagcagtgatatctttcttgaagtgtggagcccagaactgtccacagtatccagatgagctctaactagtccattgtacagtctgaacattactgcccttgttctcaattctacacttttga

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101567 True 360 lncRNA 0.47 1 34196067 34196426

Neighbor

gene id symbol gene type direction distance location
AMCG00010525 prdm6 coding upstream 54288 34135613 ~ 34141779 (+)
AMCG00010522 prdm6,LOC102788536 coding upstream 76047 34115136 ~ 34120020 (+)
AMCG00010528 NA coding upstream 96515 34095151 ~ 34099552 (+)
AMCG00010527 NA coding upstream 111008 34083894 ~ 34085059 (+)
AMCG00010530 NA coding upstream 112379 34057866 ~ 34083688 (+)
AMCG00010533 csnk1g2,LOC101079856,LOC104942790 coding downstream 24390 34220816 ~ 34228666 (+)
AMCG00010534 NA coding downstream 46353 34242779 ~ 34252058 (+)
AMCG00010537 NA coding downstream 462931 34659357 ~ 34673101 (+)
AMCG00010539 NA coding downstream 492322 34688748 ~ 34694681 (+)
AMCG00010540 NA coding downstream 511934 34708360 ~ 34721676 (+)
G81383 NA non-coding upstream 91427 34102838 ~ 34104640 (+)
G81372 NA non-coding upstream 160269 34032704 ~ 34035798 (+)
G81279 NA non-coding upstream 880498 33310852 ~ 33315569 (+)
G81226 NA non-coding upstream 1168107 33026897 ~ 33027960 (+)
G81215 NA non-coding upstream 1227560 32968261 ~ 32968507 (+)
G81474 NA non-coding downstream 483550 34679976 ~ 34680716 (+)
G81479 aldh7a1,LOC102786701 non-coding downstream 487863 34684289 ~ 34685762 (+)
G81489 NA non-coding downstream 498433 34694859 ~ 34696304 (+)
G81575 NA non-coding downstream 812146 35008572 ~ 35012190 (+)
G81577 fbn2 non-coding downstream 816529 35012955 ~ 35013654 (+)
AMCG00010529 NA other upstream 257830 33903815 ~ 33938237 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other upstream 1665801 32474033 ~ 32530266 (+)
AMCG00010467 NA other upstream 3378464 30766337 ~ 30817603 (+)
AMCG00010431 NA other upstream 4692544 29494563 ~ 29503523 (+)
AMCG00010407 NA other upstream 5930624 28242989 ~ 28265443 (+)
G81496 NA other downstream 505012 34701438 ~ 34707394 (+)
AMCG00010545 megf10 other downstream 560093 34756519 ~ 34845876 (+)
G81576 NA other downstream 815889 35012315 ~ 35012693 (+)
AMCG00010562 NA other downstream 1273909 35470335 ~ 35477590 (+)
AMCG00010563 cdc42se2 other downstream 1284374 35480800 ~ 35526224 (+)

Expression


Co-expression Network