G81479 (aldh7a1,LOC102786701)


Basic Information

Item Value
gene id G81479
gene name aldh7a1,LOC102786701
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 34684289 ~ 34685762 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU101644
GGAAGGAGTAACTTATACAATTAGTAAATAATGTCTGGAGTAACACATCTGTGTGTTATATGCctgtgtaaaaatacatattcatgcAAGTGCATGACTGAGGATCATTGGGAAGCATAATTGGTTTTTGCGTGCCATAGATAAACCACAGAGTCATCAGGTATTCAGAGCAAGAAAATGCCTTCAATGCGATAAGACAGCGGGACACACAGGTGTTCAAACACAGAGCACGTCACACGTCACAACACAGTGCTTACCCAATATCAGCCCCTCCACACGTCATCGAGCAAATTGCACCGGGCAGGTTGTTCTCTTCCAGTACCTCTGCAACTATTTTTGTAACAGCTACACTGGTGAGGGGAGTTGTCGGTGCACCTTTCCAGAGGCAAACGTTCCCACAGATGAGTGCAATAGCATTGTTCCAACCATAAACTGCTACTGGAAAGTTAAAGGCGGTGATGATCCCAACAAGACCCACAGGGTTCCACTGCTCAATAAGGGCATGGCCTGGTCTCTCCGACGGAAGAACAGGCCCACCAATCATTCGGGACAGACCAACTGCATAGTCACAGACATCCACGTATTCCTGGACCTCTCCCACACCCTCCACGTAGATCTTGCCCATTTCCAAGGAAACctatgagggggaaaaaagtaaaaaacaggatttatttttcaatttgatgcatgaaaggcaaaaaaaaaaaaaacacacaatgaacCAAAAAGTACCAaatatgagaagaaaaaaaacactcatttTATGTGGTCAAAAAATGGTCTATAG

Function

symbol description
aldh7a1 Enables alpha-aminoadipate acetyltransferase activity. Acts upstream of or within camera-type eye development; cartilage development; and pectoral fin development. Is expressed in several structures, including alar plate midbrain region; fin bud; musculature system; nervous system; and pharyngeal arch. Used to study epilepsy and pyridoxine-dependent epilepsy. Human ortholog(s) of this gene implicated in pyridoxine-dependent epilepsy. Orthologous to human ALDH7A1 (aldehyde dehydrogenase 7 family member A1).

NR:

description
PREDICTED: alpha-aminoadipic semialdehyde dehydrogenase

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101644 True 787 lncRNA 0.43 4 34684289 34685762

Neighbor

gene id symbol gene type direction distance location
AMCG00010537 NA coding upstream 11188 34659357 ~ 34673101 (+)
AMCG00010534 NA coding upstream 432231 34242779 ~ 34252058 (+)
AMCG00010533 csnk1g2,LOC101079856,LOC104942790 coding upstream 455623 34220816 ~ 34228666 (+)
AMCG00010525 prdm6 coding upstream 542510 34135613 ~ 34141779 (+)
AMCG00010522 prdm6,LOC102788536 coding upstream 564269 34115136 ~ 34120020 (+)
AMCG00010539 NA coding downstream 2986 34688748 ~ 34694681 (+)
AMCG00010540 NA coding downstream 22598 34708360 ~ 34721676 (+)
AMCG00010544 NA coding downstream 83907 34769669 ~ 34784663 (+)
AMCG00010546 prrc1,LOC107572184 coding downstream 162146 34847908 ~ 34857521 (+)
AMCG00010547 NA coding downstream 217741 34903503 ~ 34904362 (+)
G81474 NA non-coding upstream 3573 34679976 ~ 34680716 (+)
G81407 NA non-coding upstream 487863 34196067 ~ 34196426 (+)
G81383 NA non-coding upstream 579649 34102838 ~ 34104640 (+)
G81372 NA non-coding upstream 648491 34032704 ~ 34035798 (+)
G81279 NA non-coding upstream 1368720 33310852 ~ 33315569 (+)
G81489 NA non-coding downstream 9097 34694859 ~ 34696304 (+)
G81575 NA non-coding downstream 322810 35008572 ~ 35012190 (+)
G81577 fbn2 non-coding downstream 327193 35012955 ~ 35013654 (+)
G81580 NA non-coding downstream 330313 35016075 ~ 35016334 (+)
G81581 LOC108412713 non-coding downstream 331147 35016909 ~ 35017132 (+)
AMCG00010529 NA other upstream 746052 33903815 ~ 33938237 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other upstream 2154023 32474033 ~ 32530266 (+)
AMCG00010467 NA other upstream 3866686 30766337 ~ 30817603 (+)
AMCG00010431 NA other upstream 5180766 29494563 ~ 29503523 (+)
AMCG00010407 NA other upstream 6418846 28242989 ~ 28265443 (+)
G81496 NA other downstream 15676 34701438 ~ 34707394 (+)
AMCG00010545 megf10 other downstream 70757 34756519 ~ 34845876 (+)
G81576 NA other downstream 326553 35012315 ~ 35012693 (+)
AMCG00010562 NA other downstream 784573 35470335 ~ 35477590 (+)
AMCG00010563 cdc42se2 other downstream 795038 35480800 ~ 35526224 (+)

Expression


Co-expression Network