G81496


Basic Information

Item Value
gene id G81496
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 34701438 ~ 34707394 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU101662
ACGCTGATGGCAGCGAGAAGAGACGCGTTTCTGTTCGCATCGCTTGATAATAAATAGGATGTACCCCAGCTCCCTCTACGCCTGGCATTGTGTGTGGATGAGTTGGAGTTTTCTTCTGTACAGCATTAGgTCCTGTGAAGGAGCACCACTGAAACAGAAAGATCTATTTAAGGCTACACAGCCTCCACCCTGTTGGGTGACAGAAGAGTTTACAGTGCAGCAGGACTGCTCCCCATGCAGTGAATATCAAAAGAAAACTGAAGCACAGTGTGTTTCTTCTGGCTTGATAGAGCAATTAAAGTGCAACAAATCTGGCCATGTCGAATATCGAAGTTGTCGCTCAGCTGCTGCCGAAGAGCTGAAATTCTGGAAGTTTGAAGGGGCGATGCTGGCATTCAGCACGGTGTTCGCCATTCTTGTGATGCTCCGTCAGCGGAAACTGGACAGACGGGCCGAATATAAAGTCCGACAACAGATCCAAGGAATATAAATGAACTGCAGAGttctctgtttgctttttttttccacataatttattttttcagttaaatgtGATGTTTTCTCTTAATAGAGTACTTTTGAGAATTTGTATTCTAATTACACTAATGACAacctaatgatttatttttttccccatatatgaaagatacatataaaatgtagtATTGCACAGACTTAAGTCTCCTTTAAATAAGGGCACACACTTCtaatcaaacaaaccaaagcaGATGCCTTAATTTGTGCTTGCTGCCCATATCTGGCCAGTTATTAGACCCATTAAACCAGTACTAAATTAATCggcatttcattttacacaTAATCTAAGGCagtagtgtggtgtagtggttagggctctggactggtgggggcactgctgttatACCCTTGAGTGAGAtactagattgctccagtaaagacccagctgtataaatggggaaatatatgtataaaataatataacaattgtaagaTTGGAAAACTCACCAAATCTATTATGACACCATTCAAATGTGTATAATTTCCTGTTAACTAAAACAACATGCTAAAATTCTCCTGTTTATAGGTGAGACTGTGACTAAAGCAGTATTAACACTGCAGTGgtgaaaatacttaattttacacTGGATCATtttcaggaaaaaatacattaaacttttCAATTGAGAATGGatagattattttttagttgTAATTTCTTCgagcaaaatacatacatgtttatatagttCGCTTAATAACTACCTCGGATATGTCCACTTTCGCATTCCCATTTTCAGCACTGGACCCTCGATACAAAACCCTGCTTTACACACCCATGCATAGAAGAAACATGTTCACATAATTTATGGAGTTTTCAACTTTCAGTTCTTATCCATTGGGTGCTGGAAATACATGAAGTAAGATCTGTACATTGTGAGTAACTGGACAGTTTTCCAAATCAACTGAACCATTTGTGAATAGGTATTGAATATGTAATAACCTTCAAAATAGGCTATATAAGAGATTTAGTTTAACAGCTTAACTAAAAAGggctaattattttaatacgtacatgtgtgtttttgaCTAAATATGTAATACACTAACAGCTAGCTGGTTGGTAGGC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101662 True 1606 TUCP 0.38 6 34701438 34707394

Neighbor

gene id symbol gene type direction distance location
AMCG00010539 NA coding upstream 6757 34688748 ~ 34694681 (+)
AMCG00010537 NA coding upstream 28337 34659357 ~ 34673101 (+)
AMCG00010534 NA coding upstream 449380 34242779 ~ 34252058 (+)
AMCG00010533 csnk1g2,LOC101079856,LOC104942790 coding upstream 472772 34220816 ~ 34228666 (+)
AMCG00010525 prdm6 coding upstream 559659 34135613 ~ 34141779 (+)
AMCG00010540 NA coding downstream 966 34708360 ~ 34721676 (+)
AMCG00010544 NA coding downstream 62275 34769669 ~ 34784663 (+)
AMCG00010546 prrc1,LOC107572184 coding downstream 140514 34847908 ~ 34857521 (+)
AMCG00010547 NA coding downstream 196109 34903503 ~ 34904362 (+)
AMCG00010550 NA coding downstream 223153 34930547 ~ 34931155 (+)
G81489 NA non-coding upstream 5134 34694859 ~ 34696304 (+)
G81479 aldh7a1,LOC102786701 non-coding upstream 15676 34684289 ~ 34685762 (+)
G81474 NA non-coding upstream 20722 34679976 ~ 34680716 (+)
G81407 NA non-coding upstream 505012 34196067 ~ 34196426 (+)
G81383 NA non-coding upstream 596798 34102838 ~ 34104640 (+)
G81575 NA non-coding downstream 301178 35008572 ~ 35012190 (+)
G81577 fbn2 non-coding downstream 305561 35012955 ~ 35013654 (+)
G81580 NA non-coding downstream 308681 35016075 ~ 35016334 (+)
G81581 LOC108412713 non-coding downstream 309515 35016909 ~ 35017132 (+)
G81582 NA non-coding downstream 331863 35039257 ~ 35039467 (+)
AMCG00010529 NA other upstream 763201 33903815 ~ 33938237 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other upstream 2171172 32474033 ~ 32530266 (+)
AMCG00010467 NA other upstream 3883835 30766337 ~ 30817603 (+)
AMCG00010431 NA other upstream 5197915 29494563 ~ 29503523 (+)
AMCG00010407 NA other upstream 6435995 28242989 ~ 28265443 (+)
AMCG00010545 megf10 other downstream 49125 34756519 ~ 34845876 (+)
G81576 NA other downstream 304921 35012315 ~ 35012693 (+)
AMCG00010562 NA other downstream 762941 35470335 ~ 35477590 (+)
AMCG00010563 cdc42se2 other downstream 773406 35480800 ~ 35526224 (+)
AMCG00010578 NA other downstream 1369719 36077113 ~ 36079892 (+)

Expression


Co-expression Network