G81575


Basic Information

Item Value
gene id G81575
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 35008572 ~ 35012190 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU101758
CCAAAATAAGCTTTATTGTAGTGATGATACTGATACACAAATCTACAAAGTCCTTATAAATTGTTATAACAGGATGTTAAAAATAGGTTTTGTAAAAAATCATTgtatctgttaaaaaaacaaagcttttttttggtattgctGTACAGGACACTGGTAACAAAATCTTTGTACAAACACTGTCAGTATGTATGGAGGGTATTTCAGAAAGATTGTCTGTCTCACAGTACCAAGGCTTAAAAGCACCAGTAAAATACCCTTTAGTGAGGGTAGTAAAGACTTACACAACATACAAACTTTCCTGTAAAATATTCTAATAACTAAGAGGCATTCATTGTACACACATACCTTTTGTATAGAATAatagtaaaatgaaaaatatggtATATAAACTACAGTAATACTTATGTACCAGGAATGTAATGAATCTTTCCTCAAAAATCCAAGAACTACCCATCGCAATTTTAATGTGAATATAACATTAACCCTTTGAATCTGAGCAGTACCATTCGTTCTTGACGAGCACCCCATGGAAATGTTTCAGAGAGAAAACACATCGGACAGTTATGTGTTCTTTGAGCTGCCCACACTGGAGTTACATGTTAAAAGCACCTAGCTAAGAATGAGGTGTTGTGGTTGTTAATTACAGTACTGATAGACCTGTGTTGATTTGACAATACTAACAGTCAAGGTATTTTGCTATAATGAACATTTTTAGCATATGATAAATATGATCAATTTTGGTATGTTCCTGCAAAAGGCTTCACAGAAACATGATTTGAACCACTTCAATGTGTAAGAATGCAATTGTAGCCATTTTAGCTATTTATTACTTTGGTGGGTAAATCACAATTCTCTCAAAAGGATTACAAAAGCTTAATTGAAAACATAGaagggaaacaaatatatacaggcTTAAAAAAACCTGAGgatagtttttctgtttttcacatgaataaatataaaaaaatgattattttaaaaacatcgCCATTGTAAAATGACACTTTAAGTAAATTTACAATGTTTCACCAATCTGACAGTATTGTCACTTCAGCAGACAATATAATACCCTTGTTTGGGATTTTTGTAAAGTCTGCAAGAAAAGCCATTTTCTGTTATGTATACCTGTAAAAGGACACGTTGAATGTTGAATTGATTGTCTATCGTGGCCTTTGATTTGACTTTAACAATCTGGTTTACAAACTTTATGAAAGTTTGTCACAATATTCACAGAAAGAATATGGCTTGGTTGTCAGGCTTAGTATTATATCAAATATGTGGAGTCTGATAATGCACtactgatcatttaaaaataattatctgaATAAGCCTCTGAAAATTCAGGCATGAAGTGGTTTTTAGCTTAATGTTGGTATTTACAGGCTGCCAACATTTCACAACCGATGTGAGTGATGAGACTAGTGATAATTACAAGAGGCGGGGAGGGGGGATTCTGCTTTGATCAGAAggttgtgtggggggggggttatagCTGTGGCATTACCTCAAGCACTGATACAAATTGCATGTGATCCAATACGTGCAAGCGTGAGAATCAATCCAAATACGGTCAGTGGGCAGCTCTGGtagcatatattttatatatatatatttgtatatattccttttttatttcataaaatgaaaacaggtgTAGCAATATATAGAGACGAACCTTAATTGTTAATTGTCCAAGACCTGAAAGCTGCAAACAGGATACATTTACAGTTCCATATACCAGACATTGTCTGaccatatatataatgtaaataaatacacatctataaacacaaaataataaaaacatatatggCAAAACACCTCAAATGTTAGACTGTTACACTGAGAAATGGCTCATGTTTTTGTCCCAACACAGTACTAGGATACTGTTAAATGTGAAGATGAACATCATTAGATCATATTGCTTACTCTAAATTCAATCCATTAACAAACAGTTATCTTGGGTATCAGTACAATGTCGGCTGGGTGACGTGATGAACACGTCCTGGTCATGGAGTTTGGTCACGCAGTCCTCGATAGGGAATGGGAGAGGTCTCCGTCTGTTTAAAGTCAATGATTTAAAACGTTTCTTTTCTCCTGATACAGTCTGTTCATGACGATAAATAAAGACCAATCTGAACGAGTCACAGATCGACTCTCTGGATGGAAACATTGCCGTGATCCACCCGGGTCTCACTGCAGCTTGATCTGCAGCCTCATCCTCAGGCTCTCGCCCAGCTCTCCCGACAGGTAGTCCGTGTCTTTAGAGTCCTCCAGTTTCTGCAGCTCCTGCTGTCTGTACAGAGGGACACTGCTGATCTCTAAGTCGTAGGTCCCAGGTAGGGCCTTCCTCTTGGCCGTGTGCAGGTAACTGAGGCCCTCCCGCTGGTGGATGCGGAACAGCCCGTCCTCGTTGCCGGAGGAAATGACATAGCGCACGTGATTGGTGAGAGGCTGGATGGCCGGGATGAGCTCCAGGATGTGCTCTTTGGGGTTCAGCTCCGAGATGTTGAGACTCAGAACCACAGGGCTGTCGATGTCCAGGCTGGCCAAGCTCACTGGCTG

Function

GO: NA

KEGG:

id description
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU101758 True 2568 lncRNA 0.38 2 35008572 35012190

Neighbor

gene id symbol gene type direction distance location
AMCG00010548 NA coding upstream 4684 34962348 ~ 35003888 (+)
AMCG00010550 NA coding upstream 77417 34930547 ~ 34931155 (+)
AMCG00010547 NA coding upstream 104210 34903503 ~ 34904362 (+)
AMCG00010546 prrc1,LOC107572184 coding upstream 151051 34847908 ~ 34857521 (+)
AMCG00010544 NA coding upstream 223909 34769669 ~ 34784663 (+)
AMCG00010553 NA coding downstream 87925 35100115 ~ 35107055 (+)
AMCG00010552 NA coding downstream 109424 35121614 ~ 35139130 (+)
AMCG00010551 isoc1 coding downstream 130376 35142566 ~ 35149632 (+)
AMCG00010557 NA coding downstream 170741 35182931 ~ 35183883 (+)
AMCG00010555 NA coding downstream 177193 35189383 ~ 35193509 (+)
G81489 NA non-coding upstream 312268 34694859 ~ 34696304 (+)
G81479 aldh7a1,LOC102786701 non-coding upstream 322810 34684289 ~ 34685762 (+)
G81474 NA non-coding upstream 327856 34679976 ~ 34680716 (+)
G81407 NA non-coding upstream 812146 34196067 ~ 34196426 (+)
G81383 NA non-coding upstream 903932 34102838 ~ 34104640 (+)
G81577 fbn2 non-coding downstream 765 35012955 ~ 35013654 (+)
G81580 NA non-coding downstream 3885 35016075 ~ 35016334 (+)
G81581 LOC108412713 non-coding downstream 4719 35016909 ~ 35017132 (+)
G81582 NA non-coding downstream 27067 35039257 ~ 35039467 (+)
G81583 NA non-coding downstream 38215 35050405 ~ 35050612 (+)
AMCG00010545 megf10 other upstream 162696 34756519 ~ 34845876 (+)
G81496 NA other upstream 301178 34701438 ~ 34707394 (+)
AMCG00010529 NA other upstream 1070335 33903815 ~ 33938237 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other upstream 2478306 32474033 ~ 32530266 (+)
AMCG00010467 NA other upstream 4190969 30766337 ~ 30817603 (+)
G81576 NA other downstream 125 35012315 ~ 35012693 (+)
AMCG00010562 NA other downstream 458145 35470335 ~ 35477590 (+)
AMCG00010563 cdc42se2 other downstream 468610 35480800 ~ 35526224 (+)
AMCG00010578 NA other downstream 1064923 36077113 ~ 36079892 (+)
AMCG00010585 NA other downstream 1079349 36091539 ~ 36094497 (+)

Expression


Co-expression Network