G81581 (LOC108412713)


Basic Information

Item Value
gene id G81581
gene name LOC108412713
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 35016909 ~ 35017132 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU101764
CTGAGCCATCTGTGGTGTAACCGGGGCCATGGGGACAGAGCTTCTTGTACTGTGTGGTTCCAGGCAAGGGGCATAGTTCACACTGGTTGCCCCAGCCTCGCCCGCCATCACAGCAACACTCCGACTTGGTGGAAGGGTTACGACTGCTAGAAGACATCTGGCACATAGTCTGCAGGACCTCAGTGAAGCAGAAACCCTCCCGATAGTCTGTGGaagtaaaacag

Function

NR:

description
PREDICTED: fibrillin-2-like, partial

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101764 True 224 lncRNA 0.55 1 35016909 35017132

Neighbor

gene id symbol gene type direction distance location
AMCG00010548 NA coding upstream 13021 34962348 ~ 35003888 (+)
AMCG00010550 NA coding upstream 85754 34930547 ~ 34931155 (+)
AMCG00010547 NA coding upstream 112547 34903503 ~ 34904362 (+)
AMCG00010546 prrc1,LOC107572184 coding upstream 159388 34847908 ~ 34857521 (+)
AMCG00010544 NA coding upstream 232246 34769669 ~ 34784663 (+)
AMCG00010553 NA coding downstream 82983 35100115 ~ 35107055 (+)
AMCG00010552 NA coding downstream 104482 35121614 ~ 35139130 (+)
AMCG00010551 isoc1 coding downstream 125434 35142566 ~ 35149632 (+)
AMCG00010557 NA coding downstream 165799 35182931 ~ 35183883 (+)
AMCG00010555 NA coding downstream 172251 35189383 ~ 35193509 (+)
G81580 NA non-coding upstream 575 35016075 ~ 35016334 (+)
G81577 fbn2 non-coding upstream 3255 35012955 ~ 35013654 (+)
G81575 NA non-coding upstream 4719 35008572 ~ 35012190 (+)
G81489 NA non-coding upstream 320605 34694859 ~ 34696304 (+)
G81479 aldh7a1,LOC102786701 non-coding upstream 331147 34684289 ~ 34685762 (+)
G81582 NA non-coding downstream 22125 35039257 ~ 35039467 (+)
G81583 NA non-coding downstream 33273 35050405 ~ 35050612 (+)
G81586 NA non-coding downstream 85220 35102352 ~ 35102584 (+)
G81675 NA non-coding downstream 645031 35662163 ~ 35666680 (+)
G81707 NA non-coding downstream 685557 35702689 ~ 35704527 (+)
G81576 NA other upstream 4216 35012315 ~ 35012693 (+)
AMCG00010545 megf10 other upstream 171033 34756519 ~ 34845876 (+)
G81496 NA other upstream 309515 34701438 ~ 34707394 (+)
AMCG00010529 NA other upstream 1078672 33903815 ~ 33938237 (+)
AMCG00010497 dcp2,LOC107568646,LOC104944318 other upstream 2486643 32474033 ~ 32530266 (+)
AMCG00010562 NA other downstream 453203 35470335 ~ 35477590 (+)
AMCG00010563 cdc42se2 other downstream 463668 35480800 ~ 35526224 (+)
AMCG00010578 NA other downstream 1059981 36077113 ~ 36079892 (+)
AMCG00010585 NA other downstream 1074407 36091539 ~ 36094497 (+)
G81971 NA other downstream 2213296 37230428 ~ 37251169 (+)

Expression


Co-expression Network