G81675


Basic Information

Item Value
gene id G81675
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 35662163 ~ 35666680 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU101882
ttttccttccttggaccactttcgataggtactgaccactgcagaccgggaacaccccacaagagctgcagatttggagatgctctgacccagtcgtctagccatcacaatttggcccttgttaaagtcgctcagatccttacgcttgcccatttttcctgcttctaacacatcaattgTGAGGACACTATGTTCAtgttgctgcctaatatattcacccactgacaggtgccatgatNNNNNNattatcagtgttattcacttcacttgtcagtggtcataaagttatggctgatcggtgtattttctttgcattatttgaggtctgacaacactgcattttttttgttattttgaccagttgtcattttctgcaaatcaaatgcacttttgagagttcagtggtgcaaaacccataggcactggtctacacagatgtggaaaaaagtgatatggtcagatgagtcatcctacaccatattctcgacaagtgggtgtacaccaagagaacagtacaggcctcactgcttgacccctacagtgtgGAAAATGCAAATTGTCATTGCAAATGATTACAAAGTTATTCcaagtgatcacctttatcctatggtgaaacatttctatcctgatgatCTTTCTGTTCCAGATGACAATGCctccatccacagggcacaagggcactgaatggtttgatgagtatgaaaatgatgtgactcatatgctatggccttcacagtcaccagatctcaacccaattgaacagctatgggagattctggaccgacgtgttagataGCGCTCtctaccaccatcatcaaaaccccaaatgagggaatatcttttggaagaatggtgttcatccctccagtagagtccagagactcgtacaatctgtgccaagagcactgaagctgttctggcggctcctggtggcccaacaccttattgagacactttatgttggctgttccttccagcaggacaatgaccctaaacatacagccaaagccacactggagtggcttaaaaacaaaaaggtcaatgtcccaGAGTGGTctagtcaaagcccggacctcaatccaattgagaatatgtggaatcAGTTTAtggaaaatgtggaaaattgctgttcaccaaagatccccatccaacttgatggagcttcagcaattttgcaaagaagaatgggcacaaTTGCTgtctggtagagacttatccacatagactcatggctctaattgctgccaaaggtgcctctaccatatattgactgaaggggtgattatttatgcattcacgtattttctgttttgtatttgtaattaatttagaacaatttacagatcatatttttcactttgacattatggacattttctgtgttgatcaatGGCAAAACTCttcaaatgtggaaaagtccaaggggggtgaatatttttgagagccactgtataagTTNN

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101882 True 1460 lncRNA 0.42 2 35662163 35666680

Neighbor

gene id symbol gene type direction distance location
AMCG00010566 ror2,LOC102784735,LOC107720387 coding upstream 49622 35604138 ~ 35612541 (+)
AMCG00010564 sptlc1 coding upstream 107164 35544049 ~ 35554999 (+)
AMCG00010560 chsy3,LOC107573232,LOC107665461 coding upstream 296882 35363710 ~ 35365281 (+)
AMCG00010558 chsy3,LOC104965884 coding upstream 396777 35261967 ~ 35265386 (+)
AMCG00010559 NA coding upstream 404872 35250836 ~ 35257291 (+)
AMCG00010570 NA coding downstream 33981 35700661 ~ 35701496 (+)
AMCG00010569 auh,LOC107720385 coding downstream 52555 35719235 ~ 35731357 (+)
AMCG00010568 auh coding downstream 79857 35746537 ~ 35751114 (+)
AMCG00010572 diras2,LOC107560410,LOC107670053,LOC107736992,LOC107702570 coding downstream 136544 35803224 ~ 35808390 (+)
AMCG00010574 NA coding downstream 276167 35942847 ~ 35944273 (+)
G81586 NA non-coding upstream 559579 35102352 ~ 35102584 (+)
G81583 NA non-coding upstream 611551 35050405 ~ 35050612 (+)
G81582 NA non-coding upstream 622696 35039257 ~ 35039467 (+)
G81581 LOC108412713 non-coding upstream 645031 35016909 ~ 35017132 (+)
G81580 NA non-coding upstream 645829 35016075 ~ 35016334 (+)
G81707 NA non-coding downstream 36009 35702689 ~ 35704527 (+)
G81710 NA non-coding downstream 40837 35707517 ~ 35713953 (+)
G81812 NA non-coding downstream 478158 36144838 ~ 36145081 (+)
G81814 NA non-coding downstream 480863 36147543 ~ 36148008 (+)
G81880 NA non-coding downstream 961221 36627901 ~ 36628706 (+)
AMCG00010563 cdc42se2 other upstream 135939 35480800 ~ 35526224 (+)
AMCG00010562 NA other upstream 184573 35470335 ~ 35477590 (+)
G81576 NA other upstream 649470 35012315 ~ 35012693 (+)
AMCG00010545 megf10 other upstream 816287 34756519 ~ 34845876 (+)
G81496 NA other upstream 954769 34701438 ~ 34707394 (+)
AMCG00010578 NA other downstream 410433 36077113 ~ 36079892 (+)
AMCG00010585 NA other downstream 424859 36091539 ~ 36094497 (+)
G81971 NA other downstream 1563748 37230428 ~ 37251169 (+)
G81987 NA other downstream 1594644 37261324 ~ 37264049 (+)
G82192 NA other downstream 2219540 37886220 ~ 37888163 (+)

Expression


Co-expression Network