G81707


Basic Information

Item Value
gene id G81707
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 35702689 ~ 35704527 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU101918
GGAGGGGTACAGTCGCAAACTGTGACCTGCAGGAAGATGACTTGAACAATTCAGCTGTGCAGGGAAGTAAACCTGGGGACCAACAGACCCAGGCTTTGAACTGTAGTCTGGGGAATTCAGAGGATAACATTCCAGCAAGGGAACAAAACAGGGATTTAAACTTGGGAGGAAACAATGTAGCTAATGATCCAAACACGCATCCTCTAACACCGCCACTTTCTCGAGAGTTGTCTGATAAGCGGCTCCAAAGTACATTTCATGCAACAGACATGCAAGAAAGGGCTGAAAACGGACATCTGAGGAACCAGTTGGCATCACTCTCTGCTGAAGTGAAACATCTTAAACAAATGCTTTTGGCAAAATCGACTgcataaatcaaaacatgttttaggtTTTTCCAAGTTAAATGCAACAAGCCTTTATCTCATCTGTATTGTACATTCTGCTCTTCTATTGTTAACTAATTGGGTGACCTTAATCTTTCATTAAGTTCCTTGTTTTGACTGGTGTCAAattttaaaccttttcttttcttctgttcttgaGTTGATGGTCCTGCACAAAGTTTACATATCCTGATTTGTTTATGCAAAATGTGCATTGCTATGTATATAAAACGattattatattcttaaaatgtttaatgaatagGTGCAGTATTgtgttaaacaatattttaagtaaatattgtTACTCTATACTCTATGCTATGTAACCAAAAAAAAGCAAGACagtattgaaaatgtatcagTAATGTACAGCGTGTCACACAATAGGTCATTAAGTGAGATTAAACCTAAAGGTTTTCTCAAGCCTTAATAGTAGTAGTTTGAATTGTTGCATTGTAGAGATCAGAGGATATGAAGCCTTTATGCATAAGTCTAAATCAcctgttatatataaaatgggcAAACTCTGAAAtagtattgatgtatttttattgaatcCAGCCTTACACTTAAAATAAGCCattattaatacttttaattgCAATTGAAAACATGgccaacaattattaaaatattaaatgcatgatGTCTACCATCGCACATCTATGTTTGGATGTGAGTTAGTGTCAATGTGTCAtgtgtatatacaaaaatgtatata
>TU101920
ACAAAAGTGAAATCAGactgaaatatgttgtttttgttcatttgaacAGAACACCTTGGCTTAATGTATAGTTATGACTTTGTATATTCTATATTTgctatgtgtgtgttatttctCAATTTGGAGTTGGAGATACAACTTGTTAcaattttgatgtattttttattttgcagatagTCTACATTCAGAAACATTCTTGTAAGTCAGTGTTAGAGAAACGGATTTGTTTATTAGGATGATAACCTTAGAGTATGAGCAGAAACTTATTTTGTAGCACTGATGCAATGTGGAATTTTGGATGAAATGTAGTTATCACTGATTAAAACAGA

Function

GO:

id name namespace
GO:0004145 diamine N-acetyltransferase activity molecular_function

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU101918 True 1110 lncRNA 0.35 1 35702689 35703798
TU101920 False 329 lncRNA 0.30 1 35704199 35704527

Neighbor

gene id symbol gene type direction distance location
AMCG00010570 NA coding upstream 1193 35700661 ~ 35701496 (+)
AMCG00010566 ror2,LOC102784735,LOC107720387 coding upstream 90148 35604138 ~ 35612541 (+)
AMCG00010564 sptlc1 coding upstream 147690 35544049 ~ 35554999 (+)
AMCG00010560 chsy3,LOC107573232,LOC107665461 coding upstream 337408 35363710 ~ 35365281 (+)
AMCG00010558 chsy3,LOC104965884 coding upstream 437303 35261967 ~ 35265386 (+)
AMCG00010569 auh,LOC107720385 coding downstream 14708 35719235 ~ 35731357 (+)
AMCG00010568 auh coding downstream 42010 35746537 ~ 35751114 (+)
AMCG00010572 diras2,LOC107560410,LOC107670053,LOC107736992,LOC107702570 coding downstream 98697 35803224 ~ 35808390 (+)
AMCG00010574 NA coding downstream 238320 35942847 ~ 35944273 (+)
AMCG00010579 NA coding downstream 281395 35985922 ~ 35988965 (+)
G81675 NA non-coding upstream 36009 35662163 ~ 35666680 (+)
G81586 NA non-coding upstream 600105 35102352 ~ 35102584 (+)
G81583 NA non-coding upstream 652077 35050405 ~ 35050612 (+)
G81582 NA non-coding upstream 663222 35039257 ~ 35039467 (+)
G81581 LOC108412713 non-coding upstream 685557 35016909 ~ 35017132 (+)
G81710 NA non-coding downstream 2990 35707517 ~ 35713953 (+)
G81812 NA non-coding downstream 440311 36144838 ~ 36145081 (+)
G81814 NA non-coding downstream 443016 36147543 ~ 36148008 (+)
G81880 NA non-coding downstream 923374 36627901 ~ 36628706 (+)
G81954 NA non-coding downstream 1408448 37112975 ~ 37113181 (+)
AMCG00010563 cdc42se2 other upstream 176465 35480800 ~ 35526224 (+)
AMCG00010562 NA other upstream 225099 35470335 ~ 35477590 (+)
G81576 NA other upstream 689996 35012315 ~ 35012693 (+)
AMCG00010545 megf10 other upstream 856813 34756519 ~ 34845876 (+)
G81496 NA other upstream 995295 34701438 ~ 34707394 (+)
AMCG00010578 NA other downstream 372586 36077113 ~ 36079892 (+)
AMCG00010585 NA other downstream 387012 36091539 ~ 36094497 (+)
G81971 NA other downstream 1525901 37230428 ~ 37251169 (+)
G81987 NA other downstream 1556797 37261324 ~ 37264049 (+)
G82192 NA other downstream 2181693 37886220 ~ 37888163 (+)

Expression


Co-expression Network