G81971


Basic Information

Item Value
gene id G81971
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 37230428 ~ 37251169 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU102256
ttattatttttaatttgcaggttTAACAGACTCTGTGACCAGCTCTTGCATCAGGACAGAGACAACCAAAAGaattgcaatattttttaagaagaaaatagtgagagagaaatgtgttacaaataagttgtcagaaaaatatgaagGGTGGCAAGACGGAGTATGCGGCTGAGTTGGGGTTCCAGAAAAAGGGAGTCCTTCCAGACAGCAACATATTTAAGAACTGGATGGAGTCAACAAAAGACAACCCAGATATTGTGGAGTATgagCTGCGGCCCATTCTCAATCTGGTGAGGGGCTTCCCCTGCGCAGTGACCAAGAGGAGAAACCTGGAGAGGGCCATCGTGGAATACTTGGAAGCATTCGACTAGTGCAAGTGCGCCCCCTGCCCCAACAACGCCAAGCCAGTGCTGTCGGGcactgagtgtctgtgtgtgtgtcagacaggAACCTATGGAGAGAACTGTGTCCAACGGGCGCCAGACTACACCTCCGATGCCGTGGATGGGTACTGGAGCTGCTGGGGTTCATGGAGTGCATGTGACTCAtcgatgaagaggaggaggaccaGAGAGTGCAATAACCCTTCCCCATTGCGTGGTGGGAAACCATGTGCCGGTGACAGCCAAGAAGACGAAGAATGCTTCATTTCCATCTTCCAAGGggAAACTCTATGTATCCATGATAATGAAGTAGAAAAAGAAGATGAACAGATCCCTACAGGGACAGATGGACCTGGTTGTTCAAAACCCCCAATTCCAGACAACGGCTATTTGAGGATAAATAAGAAGCGATATCACTTTGGCGAAATGGAGGAATTGGTCTGTTTTACTGGCTTTGAAATGGAAGGATACCCGTATGTTAGCTGTCTACCCGACGGCACGTGGAAAGTGCAGAAAGTTCAGTGCATAAAGGAGTCTTGCGAAAGACCTGCTGTACCTACTGATGTCTCTGTATCTCCATTTAAAGAGGACTACAGTGTTGGGAATGTCATTACCCTCCGCTGTGGTTCAGGTCTGGTTCTTACTGGACCTCAGTATTACACCTGTGGGACACACCTTCGCTGGGAGCCTGCCTTCCCTAGAGACATCACTTGTGAAAATGAGAGGCCCTTTGTTTCTGATGGCAGTTGCAAACTGGGAGAAAAACAGACCGACTCTGGGTGTATCTGCTTGTCACCAGAAACGGATTGCCGATCTTCCAGAGAAGATCTTTGTGTCTTGGATGCAGAAGCAGGTATTTCTTTGATGACATCCACCTGTGCCTTTCACTCGAAGAGGTGTGAAGGACAGAAGCTGCATTTCCTTAGCNNN
>TU102257
AGAAGACGAAGAATGCTTCATTTCCATCTTCCAAGGggAAACTCTATGTATCCATGATAATGAAGTAGAAAAAGAAGATGAACAGATCCCTACAGGGACAGATGGACCTGGTTGTTCAAAACCCCCAATTCCAGACAACGGCTATTTGAGGATAAATAAGAAGCGATATCACTTTGGCGAAATGGAGGAATTGGTCTGTTTTACTGGCTTTGAAATGGAAGGATACCCGTATGTTAGCTGTCTACCCGACGGCACGTGGAAAGTGCAGAAAGTTCAGTGCATAAAGGAGTCTTGCGAAAGACCTGCTGTACCTACTGATGTCTCTGTATCTCCATTTAAAGAGGACTACAGTGTTGGGAATGTCATTACCCTCCGCTGTGGTTCAGGTCTGGTTCTTACTGGACCTCAGTATTACACCTGTGGGACACACCTTCGCTGGGAGCCTGCCTTCCCTAGAGACATCACTTGTGAAAATGAGAGGCCCTTTGTTTCTGATGGCAGTTGCAAACTGGGAGAAAAACAGACCGACTCTGGGTGTATCTGCTTGTCACCAGAAACGGATTGCCGATCTTCCAGAGAAGATCTTTGTGTCTTGGATGCAGAAGCAGGTATTTCTTTGATGACATCCACCTGTGCCTTTCACTCGAAGAGGTGTGAAGGACAGAAGCTGCATTTCCTTAGCNNN

Function

GO:

id name namespace
GO:0030168 platelet activation biological_process
GO:0007596 blood coagulation biological_process
GO:0050817 coagulation biological_process
GO:0004806 triglyceride lipase activity molecular_function

KEGG:

id description
ko04610 Complement and coagulation cascades
ko05150 Staphylococcus aureus infection
ko05322 Systemic lupus erythematosus
ko05020 Prion disease

RNA

RNA id representative length rna type GC content exon number start site end site
TU102256 True 1313 TUCP 0.48 9 37230428 37251169
TU102257 False 685 TUCP 0.46 6 37235766 37251169

Neighbor

gene id symbol gene type direction distance location
AMCG00010612 rgs7bp coding upstream 7109 37221441 ~ 37223319 (+)
AMCG00010611 rnf180 coding upstream 33050 37194755 ~ 37197378 (+)
AMCG00010609 NA coding upstream 200359 37019376 ~ 37030069 (+)
AMCG00010608 ipo11 coding upstream 220733 37004385 ~ 37009695 (+)
AMCG00010605 ipo11 coding upstream 314438 36904382 ~ 36915990 (+)
AMCG00010615 clg13h5orf51,LOC106585203,LOC106580621,LOC105894184,LOC101465834 coding downstream 106102 37357271 ~ 37361755 (+)
AMCG00010622 NA coding downstream 111909 37363078 ~ 37366492 (+)
AMCG00010621 NA coding downstream 137534 37388703 ~ 37393207 (+)
AMCG00010620 NA coding downstream 142893 37394062 ~ 37400799 (+)
AMCG00010627 NA coding downstream 223741 37474910 ~ 37481880 (+)
G81954 NA non-coding upstream 117247 37112975 ~ 37113181 (+)
G81880 NA non-coding upstream 601722 36627901 ~ 36628706 (+)
G81814 NA non-coding upstream 1082420 36147543 ~ 36148008 (+)
G81812 NA non-coding upstream 1085347 36144838 ~ 36145081 (+)
G81710 NA non-coding upstream 1516475 35707517 ~ 35713953 (+)
G81983 NA non-coding downstream 998 37252167 ~ 37253628 (+)
G81990 NA non-coding downstream 15593 37266762 ~ 37267347 (+)
G82053 NA non-coding downstream 199952 37451121 ~ 37455288 (+)
G82059 NA non-coding downstream 246573 37497742 ~ 37498116 (+)
G82056 NA non-coding downstream 247948 37499117 ~ 37520738 (+)
AMCG00010585 NA other upstream 1135931 36091539 ~ 36094497 (+)
AMCG00010578 NA other upstream 1150536 36077113 ~ 36079892 (+)
AMCG00010563 cdc42se2 other upstream 1704204 35480800 ~ 35526224 (+)
AMCG00010562 NA other upstream 1752838 35470335 ~ 35477590 (+)
G81576 NA other upstream 2217735 35012315 ~ 35012693 (+)
G81987 NA other downstream 10155 37261324 ~ 37264049 (+)
G82192 NA other downstream 635051 37886220 ~ 37888163 (+)
G82236 NA other downstream 917987 38169156 ~ 38169531 (+)
AMCG00010648 NA other downstream 995852 38247021 ~ 38252010 (+)
AMCG00010655 NA other downstream 1097109 38348278 ~ 38353962 (+)

Expression


Co-expression Network