G82092


Basic Information

Item Value
gene id G82092
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 37658307 ~ 37661155 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU102398
TTGGATTTGTTCAAAATCTTTTATTTACTATAAAGACAAACACCAAAATAAGTCCAAATTATGCTATAAAATGCTTCAAATGGGGTAAaaacttttaataattaaaatatcttggtatatttaaaattacaaaggATACATTTAAGccaatttctttattttttaaaatttctttTAACCCAGAGATTTCTTGAAAACTTTGCTTGCACAGTAAGGTGCTAATAGACGTTAGCCCTTAAGCCCTGGAAATCTttgtaaaacaagaaacaaaacaagaatacagTCACATAGCATATAATATTGTGAAAGTGAACTTTGGTAGAAGAAAATCTATAGGACACCTGAGGTAGTAGAGACCGGAATAAAACAGCAATAGACgttatttacacacaaaaagaagTACCAAGTAACACAATcagcacaaaaacaataattacatgtGACGATTTCAGTCCAGCTCCgatccaaaaagaaaataagattacatcacatctgcattttcaaataaaataaatgatataaaaaggaaatacaccGCGTATACTCCAGCAAGCTGAGGGACCCACTAGCGGACTGGAAGAGAAGCCGAAGGTATTACGATTTGCAAGAAACACAAGCTGGACAGCGGATCATGTAATACTGATTAGCTGAGGTTCATCAGTTTTAAGAATCTGCCAGAAATTATCTTTTTTCCAGTATATAAAAATGGCAAGAGTGCATAAATTTAAAGctcatacagaaagattttctttaaagtaagattataaaaaataacccaaagcaaaaacagacaaatttccataaaaaaaaaagtggtacaAAAGAACAGGAGTCAAGTACAATAAATTTAGCTACCAAacttcacatttatttacattttaactcTTCAAGCTTTGTCAGCTTGTACTCCGCATAAAGAAATAGaaatttgcataaaaaaaatcaatttactATAAAAATCGtgactttctttttcattaaaactCGTTATTAAAACGCACATTATTGCCTCCTTTCATAATCTCAGACTAGAGGTTCCAGAAACAAAAACCCAAGGATTTCTCGTTTTGTACAcgtttggaaacatttaaaacagatcaAGCACCATTTTAGACCATTTTTCTAAACTGATTACAATCGGAACAACACCACTTGAAGAGTTAAatgtcaaacaattaaaatgatttaggCACATGCTCTAATCCCTAGCCTAATACGCTATGAAAACAGTCGgattcaaaagaaaagaaaagaaaaaaaactgtctgtCAAATACCTTAAATACTGTACCCAGCAATGTCCTTGCCAAAAacaagataaagttaaaaaaggaaCAGCAAATGAATGAAACGACAATTGTAGGAAAGGGCTGTCGTCTCCGATTGGGAATAAACCTCTGAGACCAATCAGAGCGGTCTGACACTGAAACAGCATCCAAGAGAAATGACAGACACACATCAATAGCAGGAagaatttccatttttttaaataggaagAAATCTGACAAGACTTCTTTTAAAGACTTTTAGAAACGACAACATCCAAAGAATCAATTTAGTCAACTCGACGAGGCTCAAATGTAACAGTGAGATCTGTAACCACAGCAGACTGTACCCTGACTCGAGAACCTTCCCCCCAAAACCCCtcgttttatttatatatatatttataaaaaatatataaatataaaaaggtcTTCGGTTAAAAGGCTAGCTTTGAAAAACAGGATGCGAGTAACACGCAAAAGCATattggtaaatatatatatatatatatatatatatatacacagctCTGTGCCGATTCATAATGGTCTTTGTTGCCAGAATATCAACCGTTCCCTGAACATTTTTAAGGAAGATAAAAGTATCTTTCCGATTACAAAACCAGGTTTACATGGCCGAACAGTAAAATGCACAAATCAAACTGCATATTCATGATAATCGTATTAAAAACCAGTGGTACGAACAGAATCCGCtgatttaaacatatttcattaaaagAACCGTCTAATGACTTGTTTCCTATAGATGTTACAGTAATATTACACCGGTGGACAGTGACTTACTCTAGTAAAACCTTTAGAACGACAGCAGTAACGAGTCCTACGCTGCGCCATCGCATGTTCGTAGCGGTGGTCTGAAACGGGAGGTCGGGATAGGACAGCCCCCCCACAGTCCTCATTATGGCTGCAAAAGTGCTCTAACAGAAACGCCGTCCACGAAACTGCCCTCCCTCACAAACGAACAGTTTTTTAAAACGAGGAAATAAAAGAGAAGCTCGGGACTAAGAAAAAAGCCGGCCAGGAAGGCCCAGTGTCGCACTTCTGAAGAGTGCAGTTCTAGAACCTCGAAGCTCGTCTGCATTCTGTGCTCAGCTGCGGCCGGCGCGGTAAGGAAGCGGGGGCCTCTCGGGGGCCCGGGGGGTGCGATCGGGTTTAAGGCTGGCGCGGCGCTCCGGGGTCCCCGGCTAGGCGGCGGTTCGCTGGGCTTCAGTAGTATCCGGGTGAGGAGCGTCCTCTCCTGGGGGGGCCCTCTACCAGTTGAGGCGGAAAACGGGGTGCTTGAGCAGCTCCCGGGAGGGCGGCCGGTCGGTGGGCTGCAGCTCCAGGCAGCGCAGGGTGACGTCCCGCAGCCCGGGGGACAGGTGCACAGGGATCGTGGGCGCGCTGGTGGCGCTGGCGATCTGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102398 True 2690 lncRNA 0.40 2 37658307 37661155

Neighbor

gene id symbol gene type direction distance location
AMCG00010626 NA coding upstream 163567 37482438 ~ 37494740 (+)
AMCG00010627 NA coding upstream 176427 37474910 ~ 37481880 (+)
AMCG00010620 NA coding upstream 257508 37394062 ~ 37400799 (+)
AMCG00010621 NA coding upstream 265100 37388703 ~ 37393207 (+)
AMCG00010622 NA coding upstream 291815 37363078 ~ 37366492 (+)
AMCG00010634 ankrd55,LOC107578565 coding downstream 107624 37768779 ~ 37781102 (+)
AMCG00010635 NA coding downstream 134374 37795529 ~ 37809247 (+)
AMCG00010636 NA coding downstream 203907 37865062 ~ 37873485 (+)
AMCG00010641 LOC106571427 coding downstream 299597 37960752 ~ 37971680 (+)
AMCG00010644 LOC108427269,LOC105894604 coding downstream 348904 38010059 ~ 38025329 (+)
G82063 NA non-coding upstream 101706 37554453 ~ 37556601 (+)
G82057 NA non-coding upstream 125163 37526083 ~ 37533144 (+)
G82056 NA non-coding upstream 137569 37499117 ~ 37520738 (+)
G82061 NA non-coding upstream 147475 37510231 ~ 37510832 (+)
G82059 NA non-coding upstream 160191 37497742 ~ 37498116 (+)
G82140 NA non-coding downstream 82370 37743525 ~ 37743731 (+)
G82156 NA non-coding downstream 164542 37825697 ~ 37825916 (+)
G82228 NA non-coding downstream 426238 38087393 ~ 38093714 (+)
G82229 NA non-coding downstream 434466 38095621 ~ 38095902 (+)
G82230 NA non-coding downstream 435871 38097026 ~ 38097286 (+)
G81987 NA other upstream 394258 37261324 ~ 37264049 (+)
G81971 NA other upstream 407138 37230428 ~ 37251169 (+)
AMCG00010585 NA other upstream 1563810 36091539 ~ 36094497 (+)
AMCG00010578 NA other upstream 1578415 36077113 ~ 36079892 (+)
AMCG00010563 cdc42se2 other upstream 2132083 35480800 ~ 35526224 (+)
G82192 NA other downstream 225065 37886220 ~ 37888163 (+)
G82236 NA other downstream 508001 38169156 ~ 38169531 (+)
AMCG00010648 NA other downstream 585866 38247021 ~ 38252010 (+)
AMCG00010655 NA other downstream 687123 38348278 ~ 38353962 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other downstream 706514 38367669 ~ 38372651 (+)

Expression


Co-expression Network