G82229


Basic Information

Item Value
gene id G82229
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 38095621 ~ 38095902 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU102584
CCCGGTTTTATGAGCATTTAAAGAGGACACTACCAACATGGCCAGCAGCACCGCAGCCCTGAGGAGTGGCATCAGTACCTCTCGCTGTGGGGGGAGTCTTTGTAGGAGTCGGGCGTGTCTCTGGAGCTTTTCAGGTAGGAACTGAGATCCCGTGCACACCCTGTGGCGTTGAGCCTCCCCCGGTGACTCAGCGGAGTGGTGTGTCGACTGGTCTCCATCGATGACGTCATCAGCACCGAGCGGCTCTCTGACACCAGGCTCTCGCTCGGACCGTTGCTCCAG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102584 True 282 lncRNA 0.60 1 38095621 38095902

Neighbor

gene id symbol gene type direction distance location
AMCG00010643 NA coding upstream 44674 38043745 ~ 38050947 (+)
AMCG00010644 LOC108427269,LOC105894604 coding upstream 70292 38010059 ~ 38025329 (+)
AMCG00010641 LOC106571427 coding upstream 123941 37960752 ~ 37971680 (+)
AMCG00010636 NA coding upstream 222136 37865062 ~ 37873485 (+)
AMCG00010635 NA coding upstream 286374 37795529 ~ 37809247 (+)
AMCG00010650 NA coding downstream 181415 38277317 ~ 38278369 (+)
AMCG00010652 NA coding downstream 210352 38306254 ~ 38317804 (+)
AMCG00010653 ppp2cb,LOC107758729,LOC105021738 coding downstream 229783 38325685 ~ 38339014 (+)
AMCG00010654 enoph1 coding downstream 279557 38375459 ~ 38378170 (+)
AMCG00010660 cops4,csn4,LOC106562268,LOC107685106 coding downstream 351401 38447303 ~ 38458936 (+)
G82228 NA non-coding upstream 1907 38087393 ~ 38093714 (+)
G82156 NA non-coding upstream 269705 37825697 ~ 37825916 (+)
G82140 NA non-coding upstream 351890 37743525 ~ 37743731 (+)
G82092 NA non-coding upstream 434466 37658307 ~ 37661155 (+)
G82063 NA non-coding upstream 539020 37554453 ~ 37556601 (+)
G82230 NA non-coding downstream 1124 38097026 ~ 38097286 (+)
G82231 NA non-coding downstream 14347 38110249 ~ 38110555 (+)
G82234 NA non-coding downstream 60495 38156397 ~ 38156598 (+)
G82250 NA non-coding downstream 189677 38285579 ~ 38287528 (+)
G82285 NA non-coding downstream 327578 38423480 ~ 38425049 (+)
G82192 NA other upstream 207458 37886220 ~ 37888163 (+)
G81987 NA other upstream 831572 37261324 ~ 37264049 (+)
G81971 NA other upstream 844452 37230428 ~ 37251169 (+)
AMCG00010585 NA other upstream 2001124 36091539 ~ 36094497 (+)
AMCG00010578 NA other upstream 2015729 36077113 ~ 36079892 (+)
G82236 NA other downstream 73254 38169156 ~ 38169531 (+)
AMCG00010648 NA other downstream 151119 38247021 ~ 38252010 (+)
AMCG00010655 NA other downstream 252376 38348278 ~ 38353962 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other downstream 271767 38367669 ~ 38372651 (+)
AMCG00010681 trim23,LOC107558665,LOC106562204,LOC106568315 other downstream 540574 38636476 ~ 38640125 (+)

Expression


Co-expression Network