G82230


Basic Information

Item Value
gene id G82230
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 38097026 ~ 38097286 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU102585
GCTCTTTGCTGATATGCACCCATAAGAGCTTTATTTTCCAAGGGAACAATCTTGGCGTGTCAGACGGGATAAAGGATCTGGGAAGAAAAGGCTGTATAGTGGTGTGAGGAGtaacagcttttatttatttacctttgaCTGGATGTGTGAGTCACGGTGGTTGAATGGTGTACTGTCGATGTGTATTGGCTTGTGGAGAATGATGTTTCCGTCTCCTTCTCGATGTTGTGCACGGCGGGGATGGGATTCTTCGAAGCGTAC

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102585 True 261 lncRNA 0.46 1 38097026 38097286

Neighbor

gene id symbol gene type direction distance location
AMCG00010643 NA coding upstream 46079 38043745 ~ 38050947 (+)
AMCG00010644 LOC108427269,LOC105894604 coding upstream 71697 38010059 ~ 38025329 (+)
AMCG00010641 LOC106571427 coding upstream 125346 37960752 ~ 37971680 (+)
AMCG00010636 NA coding upstream 223541 37865062 ~ 37873485 (+)
AMCG00010635 NA coding upstream 287779 37795529 ~ 37809247 (+)
AMCG00010650 NA coding downstream 180031 38277317 ~ 38278369 (+)
AMCG00010652 NA coding downstream 208968 38306254 ~ 38317804 (+)
AMCG00010653 ppp2cb,LOC107758729,LOC105021738 coding downstream 228399 38325685 ~ 38339014 (+)
AMCG00010654 enoph1 coding downstream 278173 38375459 ~ 38378170 (+)
AMCG00010660 cops4,csn4,LOC106562268,LOC107685106 coding downstream 350017 38447303 ~ 38458936 (+)
G82229 NA non-coding upstream 1124 38095621 ~ 38095902 (+)
G82228 NA non-coding upstream 3312 38087393 ~ 38093714 (+)
G82156 NA non-coding upstream 271110 37825697 ~ 37825916 (+)
G82140 NA non-coding upstream 353295 37743525 ~ 37743731 (+)
G82092 NA non-coding upstream 435871 37658307 ~ 37661155 (+)
G82231 NA non-coding downstream 12963 38110249 ~ 38110555 (+)
G82234 NA non-coding downstream 59111 38156397 ~ 38156598 (+)
G82250 NA non-coding downstream 188293 38285579 ~ 38287528 (+)
G82285 NA non-coding downstream 326194 38423480 ~ 38425049 (+)
G82338 NA non-coding downstream 377564 38474850 ~ 38475108 (+)
G82192 NA other upstream 208863 37886220 ~ 37888163 (+)
G81987 NA other upstream 832977 37261324 ~ 37264049 (+)
G81971 NA other upstream 845857 37230428 ~ 37251169 (+)
AMCG00010585 NA other upstream 2002529 36091539 ~ 36094497 (+)
AMCG00010578 NA other upstream 2017134 36077113 ~ 36079892 (+)
G82236 NA other downstream 71870 38169156 ~ 38169531 (+)
AMCG00010648 NA other downstream 149735 38247021 ~ 38252010 (+)
AMCG00010655 NA other downstream 250992 38348278 ~ 38353962 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other downstream 270383 38367669 ~ 38372651 (+)
AMCG00010681 trim23,LOC107558665,LOC106562204,LOC106568315 other downstream 539190 38636476 ~ 38640125 (+)

Expression


Co-expression Network