G82231


Basic Information

Item Value
gene id G82231
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 38110249 ~ 38110555 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU102586
ATAAGATATTGCATCAGAGAACGAACAGGGAGATGGATTGTATAAGGAGACTAATGATGAGACCACTTCAATTGAACCTGCAGCCTAAtttaatcaaaaacagagagaatATTTCCTATCTCGTCCAGCAGGAGAAGCCTGCCTCGATTGAGTCAGATGGGCTCCTACCTGCACAGGTATTTGGTGCTGCCGGGTATGGCGTCCAGGGTGAAGCACTCCCCTCCGTTGACACAATAGTTCTTCTTGCTGTCACTGCATTTGGTGACATGGCTTGTTCTCACTGATGGAGGCGTGCTGGTGGGCACTA

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102586 True 307 lncRNA 0.48 1 38110249 38110555

Neighbor

gene id symbol gene type direction distance location
AMCG00010643 NA coding upstream 59302 38043745 ~ 38050947 (+)
AMCG00010644 LOC108427269,LOC105894604 coding upstream 84920 38010059 ~ 38025329 (+)
AMCG00010641 LOC106571427 coding upstream 138569 37960752 ~ 37971680 (+)
AMCG00010636 NA coding upstream 236764 37865062 ~ 37873485 (+)
AMCG00010635 NA coding upstream 301002 37795529 ~ 37809247 (+)
AMCG00010650 NA coding downstream 166762 38277317 ~ 38278369 (+)
AMCG00010652 NA coding downstream 195699 38306254 ~ 38317804 (+)
AMCG00010653 ppp2cb,LOC107758729,LOC105021738 coding downstream 215130 38325685 ~ 38339014 (+)
AMCG00010654 enoph1 coding downstream 264904 38375459 ~ 38378170 (+)
AMCG00010660 cops4,csn4,LOC106562268,LOC107685106 coding downstream 336748 38447303 ~ 38458936 (+)
G82230 NA non-coding upstream 12963 38097026 ~ 38097286 (+)
G82229 NA non-coding upstream 14347 38095621 ~ 38095902 (+)
G82228 NA non-coding upstream 16535 38087393 ~ 38093714 (+)
G82156 NA non-coding upstream 284333 37825697 ~ 37825916 (+)
G82140 NA non-coding upstream 366518 37743525 ~ 37743731 (+)
G82234 NA non-coding downstream 45842 38156397 ~ 38156598 (+)
G82250 NA non-coding downstream 175024 38285579 ~ 38287528 (+)
G82285 NA non-coding downstream 312925 38423480 ~ 38425049 (+)
G82338 NA non-coding downstream 364295 38474850 ~ 38475108 (+)
G82339 NA non-coding downstream 366664 38477219 ~ 38483324 (+)
G82192 NA other upstream 222086 37886220 ~ 37888163 (+)
G81987 NA other upstream 846200 37261324 ~ 37264049 (+)
G81971 NA other upstream 859080 37230428 ~ 37251169 (+)
AMCG00010585 NA other upstream 2015752 36091539 ~ 36094497 (+)
AMCG00010578 NA other upstream 2030357 36077113 ~ 36079892 (+)
G82236 NA other downstream 58601 38169156 ~ 38169531 (+)
AMCG00010648 NA other downstream 136466 38247021 ~ 38252010 (+)
AMCG00010655 NA other downstream 237723 38348278 ~ 38353962 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other downstream 257114 38367669 ~ 38372651 (+)
AMCG00010681 trim23,LOC107558665,LOC106562204,LOC106568315 other downstream 525921 38636476 ~ 38640125 (+)

Expression


Co-expression Network