G82338


Basic Information

Item Value
gene id G82338
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 38474850 ~ 38475108 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU102751
ctttaagtgtagactttcattttaatttgagggcagttacatcaAACGGtagtgaacggtgtaggaattacaccaatttttatatgtgatccccccaattttaggggctcaaaagtatgtggacaaactaacataatcatgaattaaattgtgagtttcaatacttggtggcaaatcctttgcagtcaatgactgcctgaagtctgaacccatagacatcaccagatgctgggtttcttccctggtgatgttttgccag

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102751 True 259 lncRNA 0.39 1 38474850 38475108

Neighbor

gene id symbol gene type direction distance location
AMCG00010661 NA coding upstream 689 38468372 ~ 38474161 (+)
AMCG00010660 cops4,csn4,LOC106562268,LOC107685106 coding upstream 15914 38447303 ~ 38458936 (+)
AMCG00010654 enoph1 coding upstream 96680 38375459 ~ 38378170 (+)
AMCG00010653 ppp2cb,LOC107758729,LOC105021738 coding upstream 135836 38325685 ~ 38339014 (+)
AMCG00010652 NA coding upstream 157046 38306254 ~ 38317804 (+)
AMCG00010670 NA coding downstream 9013 38484121 ~ 38487527 (+)
AMCG00010671 NA coding downstream 12581 38487689 ~ 38488286 (+)
AMCG00010669 NA coding downstream 40829 38515937 ~ 38534810 (+)
AMCG00010672 ppwd1 coding downstream 156696 38631804 ~ 38633945 (+)
AMCG00010673 trappc13,LOC107667267 coding downstream 177777 38652885 ~ 38661453 (+)
G82285 NA non-coding upstream 49801 38423480 ~ 38425049 (+)
G82250 NA non-coding upstream 187322 38285579 ~ 38287528 (+)
G82234 NA non-coding upstream 318252 38156397 ~ 38156598 (+)
G82231 NA non-coding upstream 364295 38110249 ~ 38110555 (+)
G82230 NA non-coding upstream 377564 38097026 ~ 38097286 (+)
G82339 NA non-coding downstream 2111 38477219 ~ 38483324 (+)
G82353 NA non-coding downstream 83358 38558466 ~ 38564283 (+)
G82468 NA non-coding downstream 551976 39027084 ~ 39027418 (+)
G82488 NA non-coding downstream 627812 39102920 ~ 39103266 (+)
G82495 NA non-coding downstream 676699 39151807 ~ 39152153 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other upstream 102199 38367669 ~ 38372651 (+)
AMCG00010655 NA other upstream 120888 38348278 ~ 38353962 (+)
AMCG00010648 NA other upstream 222840 38247021 ~ 38252010 (+)
G82236 NA other upstream 305319 38169156 ~ 38169531 (+)
G82192 NA other upstream 586687 37886220 ~ 37888163 (+)
AMCG00010681 trim23,LOC107558665,LOC106562204,LOC106568315 other downstream 161368 38636476 ~ 38640125 (+)
AMCG00010687 srek1,LOC107684347,LOC107730337,LOC107681054 other downstream 306971 38782079 ~ 38797886 (+)
AMCG00010695 NA other downstream 767749 39242857 ~ 39248625 (+)
G82671 NA other downstream 1373838 39848946 ~ 39849369 (+)
G82723 NA other downstream 1571978 40047086 ~ 40049815 (+)

Expression


Co-expression Network