G82488


Basic Information

Item Value
gene id G82488
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 39102920 ~ 39103266 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU102954
acttcatccagttctattcctcccatagtgtaattatagtggacatttttgttacctgcatgtaataccttgcacttgtccacattgaattacatctgccaggtgtcggcccacaactgaatattatctcagtccctctgaatagcctgtgctgccaagattgtatctgctgagccacctattttagtatcatctgcaaatttgacaagtttgctaacgatcccagagtccagatcattaatatagattagaaaaagcacaggccctagtactgatccctgtggaactgcactaacaacctcactccagttagaagcgactcctctaatcgacaccctctgtttcct

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102954 True 347 lncRNA 0.43 1 39102920 39103266

Neighbor

gene id symbol gene type direction distance location
AMCG00010692 LOC104930938,LOC103371488,LOC107738919 coding upstream 15667 39075665 ~ 39087253 (+)
AMCG00010690 NA coding upstream 119109 38978680 ~ 38983811 (+)
AMCG00010689 NA coding upstream 140059 38934343 ~ 38962861 (+)
AMCG00010686 NA coding upstream 222782 38867798 ~ 38880138 (+)
AMCG00010685 NA coding upstream 325875 38738449 ~ 38777045 (+)
AMCG00010693 slc30a5,LOC102789045 coding downstream 54671 39157937 ~ 39167571 (+)
AMCG00010694 NA coding downstream 65855 39169121 ~ 39171541 (+)
AMCG00010696 LOC107661783 coding downstream 209839 39313105 ~ 39333836 (+)
AMCG00010705 NA coding downstream 309250 39412516 ~ 39435225 (+)
AMCG00010706 NA coding downstream 332772 39436038 ~ 39444075 (+)
G82468 NA non-coding upstream 75502 39027084 ~ 39027418 (+)
G82353 NA non-coding upstream 538637 38558466 ~ 38564283 (+)
G82339 NA non-coding upstream 619596 38477219 ~ 38483324 (+)
G82338 NA non-coding upstream 627812 38474850 ~ 38475108 (+)
G82285 NA non-coding upstream 677871 38423480 ~ 38425049 (+)
G82495 NA non-coding downstream 48541 39151807 ~ 39152153 (+)
G82520 NA non-coding downstream 113561 39216827 ~ 39217078 (+)
G82521 NA non-coding downstream 116653 39219919 ~ 39220207 (+)
G82523 NA non-coding downstream 132559 39235825 ~ 39238488 (+)
G82545 NA non-coding downstream 203663 39306929 ~ 39307154 (+)
AMCG00010687 srek1,LOC107684347,LOC107730337,LOC107681054 other upstream 305034 38782079 ~ 38797886 (+)
AMCG00010681 trim23,LOC107558665,LOC106562204,LOC106568315 other upstream 462795 38636476 ~ 38640125 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other upstream 730269 38367669 ~ 38372651 (+)
AMCG00010655 NA other upstream 748958 38348278 ~ 38353962 (+)
AMCG00010648 NA other upstream 850910 38247021 ~ 38252010 (+)
AMCG00010695 NA other downstream 139591 39242857 ~ 39248625 (+)
G82671 NA other downstream 745680 39848946 ~ 39849369 (+)
G82723 NA other downstream 943820 40047086 ~ 40049815 (+)
AMCG00010735 clg14h18orf25 other downstream 1449101 40552367 ~ 40566357 (+)
AMCG00010738 NA other downstream 1473480 40576746 ~ 40586122 (+)

Expression


Co-expression Network