G82520


Basic Information

Item Value
gene id G82520
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 39216827 ~ 39217078 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU102990
cttcaagaaagatatcgctgctctagaggcagttcagaggagagcaaccagacttattccaggtctgaagggaatgtcctactgagagactgaggacctgaaccttttcaccctggaacagaggagactacgtggggacttgatccaagtcttcaaaatcatgaaagacatcgaccacatcaaaccagaggagcttttccagatcagcagggacacacgcacccggggacacaaatggaaattgggcttcaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU102990 True 252 lncRNA 0.49 1 39216827 39217078

Neighbor

gene id symbol gene type direction distance location
AMCG00010694 NA coding upstream 45286 39169121 ~ 39171541 (+)
AMCG00010693 slc30a5,LOC102789045 coding upstream 49256 39157937 ~ 39167571 (+)
AMCG00010692 LOC104930938,LOC103371488,LOC107738919 coding upstream 129574 39075665 ~ 39087253 (+)
AMCG00010690 NA coding upstream 233016 38978680 ~ 38983811 (+)
AMCG00010689 NA coding upstream 253966 38934343 ~ 38962861 (+)
AMCG00010696 LOC107661783 coding downstream 96027 39313105 ~ 39333836 (+)
AMCG00010705 NA coding downstream 195438 39412516 ~ 39435225 (+)
AMCG00010706 NA coding downstream 218960 39436038 ~ 39444075 (+)
AMCG00010700 man2a1 coding downstream 239259 39456337 ~ 39463494 (+)
AMCG00010702 NA coding downstream 262199 39479277 ~ 39488974 (+)
G82495 NA non-coding upstream 64674 39151807 ~ 39152153 (+)
G82488 NA non-coding upstream 113561 39102920 ~ 39103266 (+)
G82468 NA non-coding upstream 189409 39027084 ~ 39027418 (+)
G82353 NA non-coding upstream 652544 38558466 ~ 38564283 (+)
G82339 NA non-coding upstream 733503 38477219 ~ 38483324 (+)
G82521 NA non-coding downstream 2841 39219919 ~ 39220207 (+)
G82523 NA non-coding downstream 18747 39235825 ~ 39238488 (+)
G82545 NA non-coding downstream 89851 39306929 ~ 39307154 (+)
G82548 NA non-coding downstream 154620 39371698 ~ 39374063 (+)
G82561 NA non-coding downstream 239677 39456755 ~ 39509252 (+)
AMCG00010687 srek1,LOC107684347,LOC107730337,LOC107681054 other upstream 418941 38782079 ~ 38797886 (+)
AMCG00010681 trim23,LOC107558665,LOC106562204,LOC106568315 other upstream 576702 38636476 ~ 38640125 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other upstream 844176 38367669 ~ 38372651 (+)
AMCG00010655 NA other upstream 862865 38348278 ~ 38353962 (+)
AMCG00010648 NA other upstream 964817 38247021 ~ 38252010 (+)
AMCG00010695 NA other downstream 25779 39242857 ~ 39248625 (+)
G82671 NA other downstream 631868 39848946 ~ 39849369 (+)
G82723 NA other downstream 830008 40047086 ~ 40049815 (+)
AMCG00010735 clg14h18orf25 other downstream 1335289 40552367 ~ 40566357 (+)
AMCG00010738 NA other downstream 1359668 40576746 ~ 40586122 (+)

Expression


Co-expression Network