G82638


Basic Information

Item Value
gene id G82638
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 39697553 ~ 39697774 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU103139
GAAAAGCggtaatatgtttatttattctaactGTCTTTGGGCTGTTTGGAGTTTTTccctacaaaaacaaaatccacatcTAAATGGGGAGCCTCCAGCTGGCTGCTGCGATGCAGGGCGGTGATGTCAGCGCCTGATGGTGAAACGTTGCCAGattgtttgcagtttttgttAGATTTCCCTTGACCCGTTTTCTGCTCTAATATGCTGCGTTAAATGTAG

Function

GO: NA

KEGG:

id description
ko04972 Pancreatic secretion
ko04974 Protein digestion and absorption

RNA

RNA id representative length rna type GC content exon number start site end site
TU103139 True 222 lncRNA 0.44 1 39697553 39697774

Neighbor

gene id symbol gene type direction distance location
AMCG00010708 NA coding upstream 42213 39615136 ~ 39655340 (+)
AMCG00010707 NA coding upstream 104308 39575604 ~ 39593245 (+)
AMCG00010703 NA coding upstream 139340 39549522 ~ 39558213 (+)
AMCG00010701 NA coding upstream 191795 39499001 ~ 39505758 (+)
AMCG00010702 NA coding upstream 208579 39479277 ~ 39488974 (+)
AMCG00010715 NA coding downstream 105528 39803302 ~ 39803661 (+)
AMCG00010712 NA coding downstream 115658 39813432 ~ 39834594 (+)
AMCG00010714 NA coding downstream 147999 39845773 ~ 39853457 (+)
AMCG00010717 atp5a1,LOC104922468,LOC103357988 coding downstream 171398 39869172 ~ 39875972 (+)
AMCG00010719 NA coding downstream 186658 39884432 ~ 39891626 (+)
G82637 NA non-coding upstream 2435 39678473 ~ 39695118 (+)
G82620 NA non-coding upstream 150674 39546541 ~ 39546879 (+)
G82561 NA non-coding upstream 188301 39456755 ~ 39509252 (+)
G82548 NA non-coding upstream 323490 39371698 ~ 39374063 (+)
G82545 NA non-coding upstream 390399 39306929 ~ 39307154 (+)
G82639 NA non-coding downstream 1387 39699161 ~ 39699367 (+)
G82643 NA non-coding downstream 11389 39709163 ~ 39710896 (+)
G82644 NA non-coding downstream 13189 39710963 ~ 39716180 (+)
G82665 NA non-coding downstream 87385 39785159 ~ 39785468 (+)
G82668 LOC107573343 non-coding downstream 142290 39840064 ~ 39841471 (+)
AMCG00010695 NA other upstream 448928 39242857 ~ 39248625 (+)
AMCG00010687 srek1,LOC107684347,LOC107730337,LOC107681054 other upstream 899667 38782079 ~ 38797886 (+)
AMCG00010681 trim23,LOC107558665,LOC106562204,LOC106568315 other upstream 1057428 38636476 ~ 38640125 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other upstream 1324902 38367669 ~ 38372651 (+)
AMCG00010655 NA other upstream 1343591 38348278 ~ 38353962 (+)
G82671 NA other downstream 151172 39848946 ~ 39849369 (+)
G82723 NA other downstream 349312 40047086 ~ 40049815 (+)
AMCG00010735 clg14h18orf25 other downstream 854593 40552367 ~ 40566357 (+)
AMCG00010738 NA other downstream 878972 40576746 ~ 40586122 (+)
G82939 rpl37 other downstream 990743 40688517 ~ 40690850 (+)

Expression


Co-expression Network