G82639


Basic Information

Item Value
gene id G82639
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 39699161 ~ 39699367 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU103140
CCCCGGTCCATGCAGGCAAAGCATCTCTCCTTCGTGTCTTCACATCTGTGCAGCATGTTTACTGTGTAGACCCAGGCTTCTGTCAGCATGTCTAACAAATCTAAAAATCACTTTCTGCCACTGCCATGTAATGGGTTTTATTCGTGAACACTACGCACTCCATTTTCCATCTGAAAGGCGGGAATAATCTGGAGAATAAACCCAGCG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103140 True 207 lncRNA 0.46 1 39699161 39699367

Neighbor

gene id symbol gene type direction distance location
AMCG00010708 NA coding upstream 43821 39615136 ~ 39655340 (+)
AMCG00010707 NA coding upstream 105916 39575604 ~ 39593245 (+)
AMCG00010703 NA coding upstream 140948 39549522 ~ 39558213 (+)
AMCG00010701 NA coding upstream 193403 39499001 ~ 39505758 (+)
AMCG00010702 NA coding upstream 210187 39479277 ~ 39488974 (+)
AMCG00010715 NA coding downstream 103935 39803302 ~ 39803661 (+)
AMCG00010712 NA coding downstream 114065 39813432 ~ 39834594 (+)
AMCG00010714 NA coding downstream 146406 39845773 ~ 39853457 (+)
AMCG00010717 atp5a1,LOC104922468,LOC103357988 coding downstream 169805 39869172 ~ 39875972 (+)
AMCG00010719 NA coding downstream 185065 39884432 ~ 39891626 (+)
G82638 NA non-coding upstream 1387 39697553 ~ 39697774 (+)
G82637 NA non-coding upstream 4043 39678473 ~ 39695118 (+)
G82620 NA non-coding upstream 152282 39546541 ~ 39546879 (+)
G82561 NA non-coding upstream 189909 39456755 ~ 39509252 (+)
G82548 NA non-coding upstream 325098 39371698 ~ 39374063 (+)
G82643 NA non-coding downstream 9796 39709163 ~ 39710896 (+)
G82644 NA non-coding downstream 11596 39710963 ~ 39716180 (+)
G82665 NA non-coding downstream 85792 39785159 ~ 39785468 (+)
G82668 LOC107573343 non-coding downstream 140697 39840064 ~ 39841471 (+)
G82670 NA non-coding downstream 147596 39846963 ~ 39847881 (+)
AMCG00010695 NA other upstream 450536 39242857 ~ 39248625 (+)
AMCG00010687 srek1,LOC107684347,LOC107730337,LOC107681054 other upstream 901275 38782079 ~ 38797886 (+)
AMCG00010681 trim23,LOC107558665,LOC106562204,LOC106568315 other upstream 1059036 38636476 ~ 38640125 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other upstream 1326510 38367669 ~ 38372651 (+)
AMCG00010655 NA other upstream 1345199 38348278 ~ 38353962 (+)
G82671 NA other downstream 149579 39848946 ~ 39849369 (+)
G82723 NA other downstream 347719 40047086 ~ 40049815 (+)
AMCG00010735 clg14h18orf25 other downstream 853000 40552367 ~ 40566357 (+)
AMCG00010738 NA other downstream 877379 40576746 ~ 40586122 (+)
G82939 rpl37 other downstream 989150 40688517 ~ 40690850 (+)

Expression


Co-expression Network