G82671


Basic Information

Item Value
gene id G82671
gene name NA
gene type unknown
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 39848946 ~ 39849369 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU103177
aaagattgaactcatgtctggaggaaaccaggcaccgctcatcacctggccaataccatccctacagtgaagcatggtggtggcagcatcatgctgtggggatgtttttcagcggcaggaactgggagactagtcaggatcgagggaaagatgaatgcagcaatgtacagagacatccttgatgaaaacctgctccagagcgctctggacctcagactggggcgaaggttcatcttccaacaggacaacgaccctaagcacacagccaagataacaaaggagtggctacaggacaactctgtgaatgtccttgagtggcccagccagagcccagacttgaacccgatttgaacatctctggagagatctgaaaatggctgtgcaccgacgctccccatccaacctgatggagcttgagaggtcc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU103177 True 424 TUCP 0.52 1 39848946 39849369

Neighbor

gene id symbol gene type direction distance location
AMCG00010712 NA coding upstream 14352 39813432 ~ 39834594 (+)
AMCG00010715 NA coding upstream 45285 39803302 ~ 39803661 (+)
AMCG00010708 NA coding upstream 193606 39615136 ~ 39655340 (+)
AMCG00010707 NA coding upstream 255701 39575604 ~ 39593245 (+)
AMCG00010703 NA coding upstream 290733 39549522 ~ 39558213 (+)
AMCG00010717 atp5a1,LOC104922468,LOC103357988 coding downstream 19803 39869172 ~ 39875972 (+)
AMCG00010719 NA coding downstream 35063 39884432 ~ 39891626 (+)
AMCG00010718 NA coding downstream 44756 39894125 ~ 39905511 (+)
AMCG00010716 skiv2l2,LOC107571110,LOC107744101 coding downstream 68567 39917936 ~ 39972791 (+)
AMCG00010722 NA coding downstream 212399 40061768 ~ 40076718 (+)
G82670 NA non-coding upstream 1065 39846963 ~ 39847881 (+)
G82668 LOC107573343 non-coding upstream 7475 39840064 ~ 39841471 (+)
G82665 NA non-coding upstream 63478 39785159 ~ 39785468 (+)
G82644 NA non-coding upstream 132766 39710963 ~ 39716180 (+)
G82643 NA non-coding upstream 138050 39709163 ~ 39710896 (+)
G82677 NA non-coding downstream 15664 39865033 ~ 39865308 (+)
G82702 NA non-coding downstream 124892 39974261 ~ 39974578 (+)
G82716 NA non-coding downstream 171498 40020867 ~ 40021624 (+)
G82854 LOC107575789,LOC100846954 non-coding downstream 459386 40308755 ~ 40308989 (+)
G82940 NA non-coding downstream 841526 40690895 ~ 40691478 (+)
AMCG00010695 NA other upstream 600321 39242857 ~ 39248625 (+)
AMCG00010687 srek1,LOC107684347,LOC107730337,LOC107681054 other upstream 1051060 38782079 ~ 38797886 (+)
AMCG00010681 trim23,LOC107558665,LOC106562204,LOC106568315 other upstream 1208821 38636476 ~ 38640125 (+)
AMCG00010656 hnrnpdl,hnrpdl,LOC106562358,LOC107653490 other upstream 1476295 38367669 ~ 38372651 (+)
AMCG00010655 NA other upstream 1494984 38348278 ~ 38353962 (+)
G82723 NA other downstream 197717 40047086 ~ 40049815 (+)
AMCG00010735 clg14h18orf25 other downstream 702998 40552367 ~ 40566357 (+)
AMCG00010738 NA other downstream 727377 40576746 ~ 40586122 (+)
G82939 rpl37 other downstream 839148 40688517 ~ 40690850 (+)
G83001 NA other downstream 1077810 40927179 ~ 40930030 (+)

Expression


Co-expression Network

Homologous

species gene id symbol gene type chromosome NCBI id location
bowfin (Amia calva) G60101 NA non-coding CM030127.1 CM030127.1 5165267 ~ 5165488 (-)
tiger barb (Puntius tetrazona) G50729 NA unknown NC_056705.1 CM032074.1 5687790 ~ 5720325 (-)
mexican tetra (Astyanax mexicanus) G55770 NA non-coding NC_035902.1 CM008305.1 31728742 ~ 31730248 (+)