G75533


Basic Information

Item Value
gene id G75533
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 31464 ~ 41400 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU94324
TGCATTGCAGCCTGGCTCTTGTGCTCAGATGTTGTTGGTGTGTATTTGCGCACAGCATTTCAGTATGATCCTGAAGTGTAGACCCCCTGACTGCGGCTGCGCGGCATTTGCACCCACAATGCACCACGCCCGGAATGCCATCACTGCCTGCTGTGTAGAGCGCTCTCATTTCACGTCATTCACTGGATCAGGACACTACTAGAAGCTGCAGGACACCCTCACGCATCAGTCGTCCTCGAGTCAAGCATCACCTACTCAAGTCTCCGGTATCAGGAtcgttactcacccctccctcagtcaattgtctctgctcctcctcacgcctcctcctcctcagcctcaTTCCGACATCACGCATCAGGTATCAGCGCTGCAATGGGCGCGTGTGCATAAGGCCCAAGGGGAGATTATTCGCGGCGGCCACCATCAGCCCTAACAGTTTTTGGAAGTTGACCAGCTGGAGAGtcgatgcccttctgaatgacgCCAGGCATTTCTCCAACGACTCGATTTGGTCTCTGGccaggtaggcaagcattttttgagagtccagcttcattcccaagaagcccaccatCTTTGCAGGTttgagggagcttttctctagGTGAACTGTGAGACCCTGTGCAGTCAAGTGACACATGACCTCTGCTGTGTGTTCCTCcacctgaagcctggagtctgcgcacaTCCAGAATCCAGGGGGCCAAGGCTATGTCCATGCACTTCGAGTGCGGGGAGCCAGGGAAAGGCCGAACGGCAGCACACTGAAATTATATGCCTGACCCTGGAAGGTATTTCCTGTGCTCTGGAGGATGGGGACATGGAAGAAGTGTCCCCGAGGTCATAGCTAGCTATGCATGTAGCCAACATAATATTAGGGTTTGTTATAGTcccctttccttttctgtcattgctaaaGTTGCAGAAGGGAGTtcggcttttaggtgggttaacacacaatttgtggtagtttaattgcactgcacattttacaattaacagtgttttcattcactttgtcaaagtatttctaTGCAGAACTTTTCAATGAGGAAGCCATCGTAAGCCGAGGCATGTTCTAGTTGAATGTTCGACTATTAGGTCTCACCCCTAGACTACAATCTGTGAAAAAGTtccattcaattaaatacattacagacatgtaatttaatttatatttattgcaaatgttggatttacaaaatatacacgataatgtgattaaaaactattaaatatcAAGACAATATTGATTCACAATGTTTTCCCACACTATCAGCATAGGTCCAACAGCAGCCATCATGCCAtgccatttataaataaatactatttctCAAAAATCTGCAACATGAACATTCAAGCCACAAACATTTCGTTAAACAATTCGTACCATTTGCAATAACCAGTCATTTGCATTACTAAAAAGTTGCATTCAAGTGACTAGACAGTTGCAGccaaaaactacaaaagcaatttaaagatgaaaacaaaacataaccaaTGACCCTGTTATATGCACTAgttgtaaaacattatataagtTTCTGTACTGCCTAAACTATAATACAAGTATCAACAGGATACAAACTCAAACTAATAATTTTTCATACTGTTTGAAAGGTTACCAAAAACCaacttcttaaaataaattaataataaatgtactaaAAATGACATGGACATATGTTCACTTAAAAACTTTTGTTATATAGCAATTAAAGTATGGGTCATATTTGGCAGACAGAAATATACCTTGATGATGACTAATTAAATCTCAAAAGCATATTACTGCACATTCTGTGTCTTTATAGAAAACAATTATgtattaaagggaaaaaaaaaaacattagtggtttaaagaaaacattttaaagaaaacagacagcatttaaaacaatgatgaatgattcaagttttattttacacaattgcAACAATCAATCATTACTGTGTGGAAGGTTTGCCACTGTAGCTATACTTCCGATAACTATTAAATGATTGGGAAAGCCAagaagttttgattttaattttattatttcgaataaatgtaatttgtcagCTGAACAGAATTGTAGGCTTTAGATTGAAATAATAAGCAGGACAGGATACCCAGTTTGTGCCTCTATGACTTCACCTCTCTGGATTCTGTGGATACATGTCCCTGTATAATTGGTTAAAATAGGTTTCCATCTTCTTCAGGCTGCCTTCTTGGTACATGTTCCTGGAGTTTCTTGCAAGTTAATTTTTGACTGTTATGAGTCATATGACTCTTGACCAAATGTCCTGCTGCCAAAGCTGCCATGAGAGACAGTTCTCCTGCCAGGACAGTGGCACACACCACCCTGGCCAGCTGCCGTGCATTTTCACCTGGTGTGTCTGGACTAGCTCCTTGAACTCCCaacatctataataataataataatagtaataatttcacatttcttagaaaataaaataaaaaaaaatatattttttttaatcattcaaaTCAGATCACTGGAATCATTACAACTGCTAATAGTACTCAGTACAAACATGTATTGGAGGACCTAGATTCATCAAAACCTGCAACAACTGGATTCCTGTTCAAAGGTTCTAGTTTGTTGTGTAGTagcattagaaaataaaatgacagtatAATAGAAAGGATAATGGGTACAGTCAGTGTAGTCTACCAACATACTtaaaggcataatacatttcgGTCCCTGCTTTAGTGAATATCTGTAGCTATACAAGATACCAATATATGCAATATCCAATacgtcaaaaaaaaaaaaaaaatacttgtcaGTATGCATTCCAGCTACTGGTTGAATCATTTTG

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU94324 True 2829 lncRNA 0.39 4 31464 41400

Neighbor

gene id symbol gene type direction distance location
AMCG00009813 NA coding downstream 65833 107233 ~ 107590 (+)
AMCG00009810 NA coding downstream 67284 108684 ~ 122048 (+)
AMCG00009815 NA coding downstream 190634 232034 ~ 233872 (+)
AMCG00009818 ptpra,LOC107737868 coding downstream 590994 632394 ~ 654167 (+)
AMCG00009820 idh3b,LOC107737870 coding downstream 647499 688899 ~ 702109 (+)
G75528 nsa2 non-coding downstream 6159 47559 ~ 98029 (+)
G75556 NA non-coding downstream 64673 106073 ~ 107045 (+)
G75572 NA non-coding downstream 263393 304793 ~ 319899 (+)
G75600 NA non-coding downstream 545464 586864 ~ 608775 (+)
G75642 NA non-coding downstream 699079 740479 ~ 741030 (+)
AMCG00009821 NA other downstream 826280 867680 ~ 877258 (+)
AMCG00009838 NA other downstream 943196 984596 ~ 995847 (+)
G75745 NA other downstream 995806 1037206 ~ 1037442 (+)
AMCG00009846 NA other downstream 1225459 1266859 ~ 1298242 (+)
AMCG00009844 NA other downstream 1281218 1322618 ~ 1327593 (+)

Expression


Co-expression Network