G75644


Basic Information

Item Value
gene id G75644
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 742885 ~ 746072 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU94451
acatgggacaataacataaaacattattttagattaaacaaaaaatattaggTTATTAAAATGCAGCTTTCACACTTAAACCCATAAATACACACTCACCAGGAATAACCATCACAAGTTCAACCGTGACAAGCCCAACTTTGACAAAACATACACTAAATATCAGAAGGTTCTCACCTGAGAAAGCTCAGACTCACCCAGGCTGACCACCAGCTTACCCAGCTCTCTCATGCATCCATTCTCACCCTCTTACCATCTCTGTTAGTGAACGAGGATTGTAGAAACAAGGCATCCAGTTTGTAAGTAAAGATGCGTTCAGCTTGCCTCTCGTATAACAGGATCTCCTGGGCATAGGCAGTCTTGTATAGGGAGCACAGAAGGGAGTCGGAGGTCAGGGACAAATGTTTCACCAGCTCAGAAACCATATTCAAACTGTATTTAcgcagaaattaaatgtttgcacttacaattacaatataattttgcATAGTtgcaatttaatataaaaaatacttttaacagtATAAGtaactacacacactacacaactATCACTATGGTGAAGTTGACCACTGAACCTCCCTAGCCCCCAAGTACTGTTGTCAAGGAAaccccacagacagacacccacagGATTTGAGTCAGTCAAATCAGTTTTACTCAGGATGGGAGACTGGAATACAAAAGGCAGAGCTAgctgcagacagagagagagactggcagCTGCACCACAGAATCCATATAAATCACAAaagcttaaaaatgtaaaccaaagACAGATGGAGGCTGATACACACAGGAGAAATCCTTCAATatcttcatatattttatatgtagtagaaacacacacacacacgcacgcacacgagTTTAAGGTGGCCAgccttttttaaaagcatgccCGCCCAACTTCTCAAACTTCCTTCAGATACAGACTCATGAGGAAACAGCAAATATAGACCAAAActaaaggaaatggaaaaaaaaaaaaatcacattgatATGAATCTAATCCCTGCCCACATCCACTCCACTCCCTCCTGAAAATCACCAGCAGGAAAAAGACACATCACGTCTCCAGTGCCTGTCTGACAAGAGAACAGACCAAGTGGATTGAGGTCACTGTCAGAAAGTGGAGGTCTGCACTTTGTATACTACCTGTCCTGGGTGGCTATACCAGGTACCTGGGCCCTGTCCTGCCCCAAGTCATAGTTCACCTCATCCCTTAACTTACACAATACCAAGCAGACTACATACAGTGTTCAATCTGCAGTCAACCCAAGTATAAACCACATGTGATTTTCCTTATTACAtcagaggaagagggggaggggaggagaaagagagcgaTAGATAGATATATGCCCTCCACTTTCCTCATCAGTCAGCAAGCATAACACAGGATTGACACATCACTGCAGTATCTCCTagcactgagagacactgaagataattgattgattgattgatttttcagTTCATTCATTAGGCGTGCAAAAGTCTCAGGCTGAGCTGGACAGAAAGGGGAGGGAGTTTACTCTGTGGTGGCAATGTGGGAGGCGGTGGTAGGGAGTTAGGACACTCTCCTGGTAGAGCTGGAGAGGCAGACATTTCTGTGTCCAGAGTCAGGACTGATCCAGTCAGACCCAGTCCAAGCAAGACAGATGGACGCTGTAGAGAGAATTTCCTCACATGACCAGCTGTGTGGCTGCTATGCTGTTCCCTGCAGTGTCATTCTGgcagtgtggtcagtgtgtccCAAGACTGGCTGCAGTAAGACAAGTGTCACTGGAGCACACACAGTTCAGTGCTGCTCTGGTTCCGTGGCTCGCTGCCTGAGCTAGACCCCTGATTTTCCTCTGGGCACCCAACACggtccccctcctcttcctcttgtTCCACCTCTTGTTCCTCCCTTTCAAGACCCAGGCCCTGCTGGGGGGGAAGTCTGTGCCGGAGCTCCATTAGCAGGTCTTTCCCCTCGCTAGTAGGCAAGTTTCCCAGGTAATACTGAGGGGCCAGATCCACCAGCCTGTAAAGAGGAACAGAGGGACAGGGagcagagaaggagagagggagagacaggaaaaaaaaaaaaaacatgagcaaaacataaaatcatgaagagaaaaaaa

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU94451 True 2135 lncRNA 0.45 2 742885 746072

Neighbor

gene id symbol gene type direction distance location
AMCG00009820 idh3b,LOC107737870 coding upstream 40776 688899 ~ 702109 (+)
AMCG00009818 ptpra,LOC107737868 coding upstream 88718 632394 ~ 654167 (+)
AMCG00009815 NA coding upstream 509013 232034 ~ 233872 (+)
AMCG00009810 NA coding upstream 620837 108684 ~ 122048 (+)
AMCG00009813 NA coding upstream 635295 107233 ~ 107590 (+)
AMCG00009819 dqx1 coding downstream 1957 748029 ~ 749679 (+)
AMCG00009823 NA coding downstream 39453 785525 ~ 788379 (+)
AMCG00009822 smyd1b,LOC108430330,LOC107661523,LOC107712675 coding downstream 70152 816224 ~ 820264 (+)
AMCG00009825 NA coding downstream 105374 851446 ~ 859676 (+)
AMCG00009824 NA coding downstream 137341 883413 ~ 885911 (+)
G75642 NA non-coding upstream 1855 740479 ~ 741030 (+)
G75600 NA non-coding upstream 134110 586864 ~ 608775 (+)
G75572 NA non-coding upstream 422986 304793 ~ 319899 (+)
G75556 NA non-coding upstream 635840 106073 ~ 107045 (+)
G75528 nsa2 non-coding upstream 644856 47559 ~ 98029 (+)
G75743 NA non-coding downstream 285394 1031466 ~ 1031717 (+)
G75767 NA non-coding downstream 424634 1170706 ~ 1174954 (+)
G75817 NA non-coding downstream 652086 1398158 ~ 1399008 (+)
G75822 NA non-coding downstream 681939 1428011 ~ 1428389 (+)
G75826 NA non-coding downstream 739414 1485486 ~ 1486092 (+)
AMCG00009821 NA other downstream 121608 867680 ~ 877258 (+)
AMCG00009838 NA other downstream 238524 984596 ~ 995847 (+)
G75745 NA other downstream 291134 1037206 ~ 1037442 (+)
AMCG00009846 NA other downstream 520787 1266859 ~ 1298242 (+)
AMCG00009844 NA other downstream 576546 1322618 ~ 1327593 (+)

Expression


Co-expression Network