G75817


Basic Information

Item Value
gene id G75817
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 1398158 ~ 1399008 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU94681
CACCGGGAAACCATGACTCGTGGGGTACGCTGAACTCGTTTCACTTgcaacaaataagcaaacaacccccccaaaagatatattttaatatttttcttgtcCACCTTTTGACGTTTCACGTGCGTTCCTGTTTTGGTACGCTAAGtgtaaaaaaagtatttttcgaATATAATGCAGACAAACTTCACTATCGGGTGCATTATGGGGCTTCCTGATCTAGATCAGCGAGTTTCGCCGACGTGAACAGTAGAGATGCGGCTCCCGTATTTCACCCAGACGTTATAACCCCGCAGCTGCAGCCGCATTGCCAGTGATCGGGAATGTCCGCTTCAGACAGGGAAGCCATTTGGACGTTCGTGGGAAAGAAAGATGACATTATTCGCTGTAAAAAGACAACGACGGTAGTACAAGGCCGAGATGTGTTGGTAATCTACCGAGAGGGTGTGCTGTACGCCATCGACAGCTTCTGCTATCattctgGTGGACCGTTACAGCTAGGTGATATTGaggtttgtattttcttttattttattttttagtttttccaacAAGACCCCAAATATGTGTATGTACGGACAGgcgacaaattaaaggaaaaacctgaataaatgagtggaggaacataatgaatgcagatgcctccaaacaggtgtactgcatgatacaattaagc

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU94681 True 673 lncRNA 0.44 2 1398158 1399008

Neighbor

gene id symbol gene type direction distance location
AMCG00009845 NA coding upstream 84316 1309725 ~ 1313842 (+)
AMCG00009839 NA coding upstream 153058 1234756 ~ 1245100 (+)
AMCG00009840 NA coding upstream 174709 1197630 ~ 1223449 (+)
AMCG00009837 NA coding upstream 376744 1014074 ~ 1021414 (+)
AMCG00009842 NA coding upstream 423706 962006 ~ 974452 (+)
AMCG00009850 LOC107735852 coding downstream 30926 1429934 ~ 1485095 (+)
AMCG00009854 NA coding downstream 112411 1511419 ~ 1511967 (+)
AMCG00009856 mctp1,LOC106580145,LOC107703246,LOC107720291,LOC107756292 coding downstream 188290 1587298 ~ 1593804 (+)
AMCG00009855 mctp1 coding downstream 299487 1698495 ~ 1715753 (+)
AMCG00009858 NA coding downstream 386505 1785513 ~ 1809475 (+)
G75767 NA non-coding upstream 223204 1170706 ~ 1174954 (+)
G75743 NA non-coding upstream 366441 1031466 ~ 1031717 (+)
G75644 NA non-coding upstream 652086 742885 ~ 746072 (+)
G75642 NA non-coding upstream 657128 740479 ~ 741030 (+)
G75600 NA non-coding upstream 789383 586864 ~ 608775 (+)
G75822 NA non-coding downstream 29003 1428011 ~ 1428389 (+)
G75826 NA non-coding downstream 86478 1485486 ~ 1486092 (+)
G75827 NA non-coding downstream 97493 1496501 ~ 1497008 (+)
G75910 NA non-coding downstream 735387 2134395 ~ 2154555 (+)
G75914 nr2f1a,nr2f1,LOC107671052,LOC107567418,LOC106580150,LOC106585791 non-coding downstream 785371 2184379 ~ 2203222 (+)
AMCG00009851 NA other upstream 29343 1360536 ~ 1368815 (+)
G75807 NA other upstream 63108 1333967 ~ 1335050 (+)
AMCG00009844 NA other upstream 70565 1322618 ~ 1327593 (+)
AMCG00009846 NA other upstream 99916 1266859 ~ 1298242 (+)
G75745 NA other upstream 360716 1037206 ~ 1037442 (+)
AMCG00009852 NA other downstream 10172 1409180 ~ 1423122 (+)
AMCG00009863 NA other downstream 1353252 2752260 ~ 2768508 (+)
AMCG00009898 tmem167a other downstream 3511962 4910970 ~ 4920884 (+)
AMCG00009897 NA other downstream 3833624 5232632 ~ 5248181 (+)
AMCG00009915 NA other downstream 4367329 5766337 ~ 5769052 (+)

Expression


Co-expression Network