G75827


Basic Information

Item Value
gene id G75827
gene name NA
gene type non-coding
species bowfin (Amia calva)
category of species ecological fish

Chromosome Information

Item Value
chromosome id CM030129.1
NCBI id CM030129.1
chromosome length 41163702
location 1496501 ~ 1497008 (+)
genome version AmiCal1_2021_bowfin_Genome

Sequence

>TU94697
CTCGATATCCTTGCTGAGCTGCTGGACGATGTGTGTGATGGTGAGGATATGGTTCTCCAGCAGCCGGCGGGAGGCAGCCTCATTTTGGGAGGAGTCCTGGTTGACACGCAGTTTGGTGATGATGTCATCCTTGATGCGGAAGGCCTGCTCCAGCAGTGTTGCCATGGTGCGCTCTTGACTGGACAGACGGCCTTCTAGCATCCCAGATCTATTCACAGTAAAAGGGAAAGGAGCCCTATGTGGgtttgtgtggggggtgggggtgcagcTCCCGCTAAGAGTAGCAATTTCTATGATTAATGTTGAGTGCAAATTTGTACATTTCACATAAGCAAAAACTTctgacttttgtttgtttctggtttGTTCCTTAGCCTCAGCCcacaatattaaacatatacatttgaatgcagccaatcactttgcaggacatacttgtcaatcattttttttatggggccaatcacctgcagaagGAACTTGTCCATCATTTTTTGATGTAGCCAAT

Function

GO: NA

KEGG: NA

RNA

RNA id representative length rna type GC content exon number start site end site
TU94697 True 508 lncRNA 0.47 1 1496501 1497008

Neighbor

gene id symbol gene type direction distance location
AMCG00009850 LOC107735852 coding upstream 11406 1429934 ~ 1485095 (+)
AMCG00009845 NA coding upstream 182659 1309725 ~ 1313842 (+)
AMCG00009839 NA coding upstream 251401 1234756 ~ 1245100 (+)
AMCG00009840 NA coding upstream 273052 1197630 ~ 1223449 (+)
AMCG00009837 NA coding upstream 475087 1014074 ~ 1021414 (+)
AMCG00009854 NA coding downstream 14411 1511419 ~ 1511967 (+)
AMCG00009856 mctp1,LOC106580145,LOC107703246,LOC107720291,LOC107756292 coding downstream 90290 1587298 ~ 1593804 (+)
AMCG00009855 mctp1 coding downstream 201487 1698495 ~ 1715753 (+)
AMCG00009858 NA coding downstream 288505 1785513 ~ 1809475 (+)
AMCG00009860 NA coding downstream 315999 1813007 ~ 1825729 (+)
G75826 NA non-coding upstream 10409 1485486 ~ 1486092 (+)
G75822 NA non-coding upstream 68112 1428011 ~ 1428389 (+)
G75817 NA non-coding upstream 97493 1398158 ~ 1399008 (+)
G75767 NA non-coding upstream 321547 1170706 ~ 1174954 (+)
G75743 NA non-coding upstream 464784 1031466 ~ 1031717 (+)
G75910 NA non-coding downstream 637387 2134395 ~ 2154555 (+)
G75914 nr2f1a,nr2f1,LOC107671052,LOC107567418,LOC106580150,LOC106585791 non-coding downstream 687371 2184379 ~ 2203222 (+)
G75957 NA non-coding downstream 884849 2381857 ~ 2386735 (+)
G75964 NA non-coding downstream 998493 2495501 ~ 2495715 (+)
G76050 NA non-coding downstream 1630114 3127122 ~ 3128106 (+)
AMCG00009852 NA other upstream 73379 1409180 ~ 1423122 (+)
AMCG00009851 NA other upstream 127686 1360536 ~ 1368815 (+)
G75807 NA other upstream 161451 1333967 ~ 1335050 (+)
AMCG00009844 NA other upstream 168908 1322618 ~ 1327593 (+)
AMCG00009846 NA other upstream 198259 1266859 ~ 1298242 (+)
AMCG00009863 NA other downstream 1255252 2752260 ~ 2768508 (+)
AMCG00009898 tmem167a other downstream 3413962 4910970 ~ 4920884 (+)
AMCG00009897 NA other downstream 3735624 5232632 ~ 5248181 (+)
AMCG00009915 NA other downstream 4269329 5766337 ~ 5769052 (+)
AMCG00009929 sv2c,LOC107755746,LOC107748435,LOC107565680 other downstream 4562234 6059242 ~ 6085806 (+)

Expression


Co-expression Network